Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03959 Eucalyptus grandis HOM05D005099 ORTHO05D006087 1.9e-97 359.4 209 100.0
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 2.4e-52 209.5 218 55.5
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 6.6e-50 201.4 210 55.7
Duzib151G0929 Durio zibethinus HOM05D005099 ORTHO05D006087 8.6e-50 201.1 216 51.4
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 1.5e-49 200.3 215 54.0
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 1.9e-49 199.9 210 54.8
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 4.3e-49 198.7 215 57.2
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 5.6e-49 198.4 211 52.1
MELO3C021313.2 Cucumis melo HOM05D005099 ORTHO05D006087 7.3e-49 198.0 214 53.7
ClCG06G004980 Citrullus lanatus HOM05D005099 ORTHO05D006087 9.5e-49 197.6 210 53.8
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 1.6e-48 196.8 213 53.1
Dinv44353 Davidia involucrata HOM05D005099 ORTHO05D006087 3.6e-48 195.7 220 53.2
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 4.7e-48 195.3 211 53.1
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 1.1e-47 194.1 211 53.6
COL.COLO4_13826 Corchorus olitorius HOM05D005099 ORTHO05D006087 1.4e-47 193.7 216 53.2
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 1.8e-47 193.4 211 53.1
TWI73G1062 Tripterygium wilfordii HOM05D005099 ORTHO05D006087 1.8e-47 193.4 221 53.8
Glyma.09G042500 Glycine max HOM05D005099 ORTHO05D006087 5.2e-47 191.8 210 55.2
QL06p010333 Quercus lobata HOM05D005099 ORTHO05D006087 5.2e-47 191.8 219 55.3
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 5.2e-47 191.8 211 52.1
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 6.8e-47 191.4 213 55.9
VMungo1309G2116 Vigna mungo HOM05D005099 ORTHO05D006087 8.9e-47 191.0 209 51.7
vmacro15214 Vaccinium macrocarpon HOM05D005099 ORTHO05D006087 2.0e-46 189.9 187 55.1
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 4.4e-46 188.7 212 52.4
Sed0019517 Sechium edule HOM05D005099 ORTHO05D006087 4.4e-46 188.7 210 51.9
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 4.4e-46 188.7 219 52.5
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 5.8e-46 188.3 209 52.6
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 7.6e-46 188.0 212 50.5
FvH4_4g18620 Fragaria vesca HOM05D005099 ORTHO05D006087 1.7e-45 186.8 209 59.3
FAN12G1484 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.7e-45 186.8 209 59.3
FAN12G1671 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.7e-45 186.8 209 59.3
Phvul.009G250300 Phaseolus vulgaris HOM05D005099 ORTHO05D006087 4.9e-45 185.3 209 52.2
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 8.4e-45 184.5 210 50.5
RcHm_v2.0_Chr4g0423321 Rosa chinensis HOM05D005099 ORTHO05D006087 1.1e-44 184.1 213 60.6
PGR004G0666 Punica granatum HOM05D005099 ORTHO05D006087 1.4e-44 183.7 212 58.5
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 3.2e-44 182.6 215 49.8
arahy.Tifrunner.gnm1.ann1.2F59RJ Arachis hypogaea HOM05D005099 ORTHO05D006087 4.2e-44 182.2 212 51.4
FAN17G2615 Fragaria x ananassa HOM05D005099 ORTHO05D006087 4.2e-44 182.2 209 53.1
Potri.010G010600 Populus trichocarpa HOM05D005099 ORTHO05D006087 9.2e-44 181.0 214 51.9
Sabra10G0006200 Salix brachista HOM05D005099 ORTHO05D006087 1.2e-43 180.6 211 50.7
Atru.chr4.2896 Acer truncatum HOM05D005099 ORTHO05D006087 1.6e-43 180.3 214 51.9
arahy.Tifrunner.gnm1.ann1.2UKM1V Arachis hypogaea HOM05D005099 ORTHO05D006087 1.6e-43 180.3 202 51.5
FAN07G0877 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.6e-43 180.3 209 55.0
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 1.6e-43 180.3 220 49.1
Glyma.15G150400 Glycine max HOM05D005099 ORTHO05D006087 2.7e-43 179.5 211 50.7
Medtr2g435810 Medicago truncatula HOM05D005099 ORTHO05D006087 3.0e-42 176.0 214 48.6
Medtr2g436150 Medicago truncatula HOM05D005099 ORTHO05D006087 3.0e-42 176.0 214 48.6
Dinv29728 Davidia involucrata HOM05D005099 ORTHO05D006087 5.1e-42 175.3 210 51.4
CANSAT78G2455 Cannabis sativa HOM05D005099 ORTHO05D006087 1.1e-41 174.1 222 49.1
CARHR081450 Cardamine hirsuta HOM05D005099 ORTHO05D006087 1.9e-41 173.3 211 49.8
Prupe.1G124100 Prunus persica HOM05D005099 ORTHO05D006087 4.3e-41 172.2 209 51.7
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 7.3e-41 171.4 210 48.1
Nn3g21536 Nelumbo nucifera HOM05D005099 ORTHO05D006087 9.6e-41 171.0 209 48.8
Sopen01g028090 Solanum pennellii HOM05D005099 ORTHO05D006087 9.6e-41 171.0 210 49.0
AT3G06840 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 3.6e-40 169.1 218 47.7
MD16G1164800 Malus domestica HOM05D005099 ORTHO05D006087 3.6e-40 169.1 209 54.5
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 1.1e-39 167.5 215 50.7
PGSC0003DMG400011309 Solanum tuberosum HOM05D005099 ORTHO05D006087 1.1e-39 167.5 210 54.8
Cc03_g01550 Coffea canephora HOM05D005099 ORTHO05D006087 1.4e-39 167.2 213 48.8
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 1.8e-39 166.8 205 48.8
Nitab4.5_0000695g0110 Nicotiana tabacum HOM05D005099 ORTHO05D006087 2.4e-39 166.4 215 48.8
Solyc01g066440.3 Solanum lycopersicum HOM05D005099 ORTHO05D006087 5.3e-39 165.2 209 55.5
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 1.5e-38 163.7 211 47.4
AUR62015274 Chenopodium quinoa HOM05D005099 ORTHO05D006087 1.5e-38 163.7 212 47.2
Sc13g0003250 Simmondsia chinensis HOM05D005099 ORTHO05D006087 1.5e-38 163.7 212 50.0
Nitab4.5_0003767g0020 Nicotiana tabacum HOM05D005099 ORTHO05D006087 3.4e-38 162.5 211 48.8
Sp3g05800 Schrenkiella parvula HOM05D005099 ORTHO05D006087 3.4e-38 162.5 212 48.6
AUR62018071 Chenopodium quinoa HOM05D005099 ORTHO05D006087 5.8e-38 161.8 212 47.2
Nn4g25764 Nelumbo nucifera HOM05D005099 ORTHO05D006087 7.6e-38 161.4 209 48.3
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 9.9e-38 161.0 211 45.5
MSTRG.3894 Avicennia marina HOM05D005099 ORTHO05D006087 1.7e-37 160.2 219 46.1
Gorai.005G061600 Gossypium raimondii HOM05D005099 ORTHO05D006087 4.9e-37 158.7 211 46.0
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 4.9e-37 158.7 214 47.7
Gohir.D02G055600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 6.4e-37 158.3 211 46.0
Gohir.A02G050700 Gossypium hirsutum HOM05D005099 ORTHO05D006087 1.4e-36 157.1 211 45.5
THA.LOC104818909 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 1.9e-36 156.8 232 47.0
AL3G17960 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 2.4e-36 156.4 219 46.1
Aqoxy2G02900 Aquilegia oxysepala HOM05D005099 ORTHO05D006087 4.2e-36 155.6 210 48.1
CSS0049831 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 5.4e-36 155.2 214 46.7
SGA_v2.0_scaffold67G22601 Striga asiatica HOM05D005099 ORTHO05D006087 9.3e-36 154.5 212 46.7
Ah.13g074810 Amaranthus hybridus HOM05D005099 ORTHO05D006087 2.7e-35 152.9 206 45.6
Psat1g155760 Pisum sativum HOM05D005099 ORTHO05D006087 3.5e-35 152.5 213 46.9
Hund24882 Selenicereus undatus HOM05D005099 ORTHO05D006087 3.5e-35 152.5 225 44.9
Lalb_Chr20g0117371 Lupinus albus HOM05D005099 ORTHO05D006087 7.8e-35 151.4 209 51.7
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 6.6e-34 148.3 209 47.8
Lj6g0002623 Lotus japonicus HOM05D005099 ORTHO05D006087 1.1e-33 147.5 209 47.8
MD13G1165200 Malus domestica HOM05D005099 ORTHO05D006087 1.9e-33 146.7 211 54.0
Carub.0003s0637 Capsella rubella HOM05D005099 ORTHO05D006087 2.5e-33 146.4 214 44.9
BNapus_Darmor_BZH_scaffold_117p00120 Brassica napus HOM05D005099 ORTHO05D006087 1.6e-32 143.7 216 46.3
BraA01t04411Z Brassica rapa HOM05D005099 ORTHO05D006087 1.6e-32 143.7 216 46.3
Oeu053996.1 Olea europaea HOM05D005099 ORTHO05D006087 8.1e-32 141.4 205 51.7
Sp2g19520 Schrenkiella parvula HOM05D005099 ORTHO05D006087 8.1e-32 141.4 213 44.6
BcaC09g47923 Brassica carinata HOM05D005099 ORTHO05D006087 1.8e-31 140.2 212 46.2
BolC1t05583H Brassica oleracea HOM05D005099 ORTHO05D006087 1.8e-31 140.2 212 46.2
Thhalv10004959m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 2.4e-31 139.8 223 43.5
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 1.5e-30 137.1 208 43.3
Thhalv10021591m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 2.0e-30 136.7 214 43.9
PSO407G0003 Papaver somniferum HOM05D005099 ORTHO05D006087 2.6e-30 136.3 229 39.3
DCAR_002480 Daucus carota HOM05D005099 ORTHO05D006087 9.9e-30 134.4 212 41.5
Aa31LG5G17420 Aethionema arabicum HOM05D005099 ORTHO05D006087 2.2e-29 133.3 214 43.9
arahy.Tifrunner.gnm1.ann1.H54SCY Arachis hypogaea HOM05D005099 ORTHO05D006087 2.2e-29 133.3 213 44.1
arahy.Tifrunner.gnm1.ann1.L8YWMY Arachis hypogaea HOM05D005099 ORTHO05D006087 1.1e-28 131.0 213 43.7
Sed0015120 Sechium edule HOM05D005099 ORTHO05D006087 1.1e-28 131.0 210 41.9
Lsat_1_v5_gn_3_21720 Lactuca sativa HOM05D005099 ORTHO05D006087 3.2e-28 129.4 211 49.3
Cpa.g.sc50.167 Carica papaya HOM05D005099 ORTHO05D006087 4.2e-28 129.0 144 53.5
Gohir.A09G237600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 7.1e-28 128.3 220 50.5
Migut.G00130 Erythranthe guttata HOM05D005099 ORTHO05D006087 6.0e-27 125.2 212 42.0
ECA246G4673 Erigeron canadensis HOM05D005099 ORTHO05D006087 7.9e-27 124.8 221 42.1
Gohir.D09G238500 Gossypium hirsutum HOM05D005099 ORTHO05D006087 1.8e-26 123.6 215 44.2
SHI00249 Sapria himalayana HOM05D005099 ORTHO05D006087 2.5e-25 119.8 195 40.5
BraA06t26768Z Brassica rapa HOM05D005099 ORTHO05D006087 3.3e-25 119.4 227 42.7
Gorai.006G261200 Gossypium raimondii HOM05D005099 ORTHO05D006087 5.6e-25 118.6 215 46.5
A02p37910 Brassica napus HOM05D005099 ORTHO05D006087 1.3e-24 117.5 201 45.3
BcaC03g17704 Brassica carinata HOM05D005099 ORTHO05D006087 2.1e-24 116.7 201 45.3
C02p57110 Brassica napus HOM05D005099 ORTHO05D006087 2.1e-24 116.7 201 45.3
BolC2t11783H Brassica oleracea HOM05D005099 ORTHO05D006087 2.1e-24 116.7 201 45.3
BraA02t08775Z Brassica rapa HOM05D005099 ORTHO05D006087 2.1e-24 116.7 199 43.2
HanXRQChr06g0173741 Helianthus annuus HOM05D005099 ORTHO05D006087 2.8e-24 116.3 211 37.4
PSO170G0513 Papaver somniferum HOM05D005099 ORTHO05D006087 3.7e-24 115.9 221 43.4
AT5G49170 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 1.4e-23 114.0 221 41.6
BcaNung02585 Brassica carinata HOM05D005099 ORTHO05D006087 1.4e-23 114.0 247 40.1
BolC7t44497H Brassica oleracea HOM05D005099 ORTHO05D006087 1.4e-23 114.0 247 40.1
BcaB07g34138 Brassica carinata HOM05D005099 ORTHO05D006087 2.4e-23 113.2 198 41.4
BcaC06g30711 Brassica carinata HOM05D005099 ORTHO05D006087 4.0e-23 112.5 244 40.2
ATR0693G064 Amborella trichopoda HOM05D005099 ORTHO05D006087 5.3e-23 112.1 209 36.4
AL8G22700 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 2.0e-22 110.2 221 39.4
CARHR182490 Cardamine hirsuta HOM05D005099 ORTHO05D006087 5.8e-22 108.6 214 40.2
C07p39730 Brassica napus HOM05D005099 ORTHO05D006087 1.0e-21 107.8 245 38.4
A06p38540 Brassica napus HOM05D005099 ORTHO05D006087 4.9e-21 105.5 250 38.4
HPP92_011860 Vanilla planifolia HOM05D005099 ORTHO05D006087 7.1e-20 101.7 190 36.3
Carub.0008s0899 Capsella rubella HOM05D005099 ORTHO05D006087 1.6e-19 100.5 217 41.9
GSVIVG01035110001 Vitis vinifera HOM05D005099 ORTHO05D006087 2.1e-19 100.1 81 64.2
Sc19g0005440 Simmondsia chinensis HOM05D005099 ORTHO05D006087 1.0e-18 97.8 205 34.6
Nitab4.5_0011001g0010 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.3e-18 97.4 209 34.4
Nn7g36563 Nelumbo nucifera HOM05D005099 ORTHO05D006087 1.1e-17 94.4 106 48.1
DCAR_023299 Daucus carota HOM05D005099 ORTHO05D006087 2.8e-16 89.7 210 33.3
Sopen05g032840 Solanum pennellii HOM05D005099 ORTHO05D006087 1.8e-15 87.0 212 33.0
Nitab4.5_0001097g0130 Nicotiana tabacum HOM05D005099 ORTHO05D006087 2.4e-15 86.7 181 34.3
BcaC06g30713 Brassica carinata HOM05D005099 ORTHO05D006087 6.9e-15 85.1 59 66.1
Oeu035687.1 Olea europaea HOM05D005099 ORTHO05D006087 4.5e-14 82.4 209 33.0
Lj6P680T81 Lonicera japonica HOM05D005099 ORTHO05D006087 1.0e-13 81.3 56 62.5
Lalb_Chr15g0086051 Lupinus albus HOM05D005099 ORTHO05D006087 2.2e-13 80.1 96 45.8
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 1.4e-12 77.4 206 28.6
MD13G1165100 Malus domestica HOM05D005099 ORTHO05D006087 1.4e-12 77.4 180 33.9
Actinidia00002 Actinidia chinensis HOM05D005099 ORTHO05D006087 1.0e-10 71.2 59 61.0
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.3e-09 66.2 180 35.6
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 7.4e-09 65.1 212 28.3
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 2.2e-08 63.5 206 29.6
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 2.4e-07 60.1 206 27.2
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 3.1e-07 59.7 211 31.3
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 4.1e-07 59.3 207 27.5
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 1.5e-06 57.4 210 26.2
Zm00001eb346420 Zea mays HOM05D042790 ORTHO05D049961 1.5e-06 57.4 56 51.8
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 3.4e-06 56.2 206 26.7
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 4.5e-06 55.8 204 25.5
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 5.9e-06 55.5 210 30.0
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 7.7e-06 55.1 212 26.4
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 7.7e-06 55.1 209 24.9
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.0e-05 54.7 206 26.2


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