Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.1e-93 346.7 185 100.0
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 9.6e-61 237.3 190 64.7
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 4.0e-59 231.9 188 63.3
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 6.9e-59 231.1 179 67.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 6.9e-59 231.1 190 63.7
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 9.0e-59 230.7 188 62.2
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 9.0e-59 230.7 178 65.7
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 3.4e-58 228.8 186 63.4
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 4.5e-58 228.4 186 62.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.8e-58 228.0 193 62.2
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 5.8e-58 228.0 185 64.9
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 7.6e-58 227.6 193 63.2
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.7e-57 226.5 188 62.8
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 6.5e-57 224.6 191 62.8
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 6.5e-57 224.6 182 64.3
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.4e-56 223.4 188 61.7
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.5e-56 222.6 194 62.4
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 4.2e-56 221.9 193 60.6
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 5.5e-56 221.5 182 64.3
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 7.1e-56 221.1 191 58.6
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 7.1e-56 221.1 188 61.7
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 9.3e-56 220.7 186 60.2
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 9.3e-56 220.7 193 60.6
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.6e-55 219.9 194 60.3
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.6e-55 219.9 177 63.3
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.1e-55 219.5 186 61.8
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 3.5e-55 218.8 185 64.3
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 6.0e-55 218.0 199 61.3
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.3e-54 216.9 185 61.1
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.3e-54 216.9 188 59.6
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.8e-54 216.5 191 59.2
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 3.9e-54 215.3 180 62.8
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 5.1e-54 214.9 191 57.6
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.7e-54 214.5 185 60.5
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.7e-54 214.5 185 60.0
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.1e-53 213.8 185 60.5
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.5e-53 212.6 189 61.9
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.3e-53 212.2 193 58.5
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 3.3e-53 212.2 192 57.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 4.3e-53 211.8 195 60.5
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 5.7e-53 211.5 177 60.5
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.7e-53 211.5 188 59.0
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.6e-52 209.9 177 58.8
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.6e-52 209.9 177 58.8
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.8e-52 209.1 186 59.7
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 4.8e-52 208.4 189 59.8
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.4e-51 206.8 189 56.6
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.4e-51 206.8 184 62.5
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.4e-51 206.1 177 58.2
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.4e-51 206.1 184 60.9
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 5.3e-51 204.9 177 59.9
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 6.9e-51 204.5 177 59.3
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 6.9e-51 204.5 191 58.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.2e-50 203.8 187 58.3
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 7.6e-50 201.1 178 59.0
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 1.0e-49 200.7 178 60.1
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 2.2e-49 199.5 190 57.9
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 2.9e-49 199.1 195 54.9
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 2.9e-49 199.1 178 58.4
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 3.8e-49 198.7 180 58.9
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 3.8e-49 198.7 182 57.7
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 6.5e-49 198.0 191 57.6
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 8.5e-49 197.6 135 67.4
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 1.1e-48 197.2 225 52.4
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.1e-48 197.2 127 74.8
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 3.2e-48 195.7 186 57.0
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.5e-48 194.9 132 70.5
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 7.2e-48 194.5 182 56.0
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 9.3e-48 194.1 181 58.6
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 9.3e-48 194.1 188 57.4
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.6e-47 193.4 186 57.5
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 2.1e-47 193.0 186 59.7
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.3e-46 190.3 186 57.5
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.3e-46 190.3 194 52.1
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 3.0e-46 189.1 179 55.3
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 3.0e-46 189.1 190 55.8
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 3.9e-46 188.7 186 55.4
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 3.9e-46 188.7 186 55.4
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.9e-46 188.7 185 54.1
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 6.7e-46 188.0 185 56.2
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 6.7e-46 188.0 186 54.8
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 8.7e-46 187.6 186 54.8
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 2.5e-45 186.0 188 54.8
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 4.3e-45 185.3 185 54.6
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 2.2e-44 183.0 185 54.6
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.8e-44 182.6 114 74.6
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.8e-44 182.6 187 54.5
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 6.3e-44 181.4 185 54.1
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.4e-43 180.3 181 54.1
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-43 180.3 181 54.1
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.4e-43 180.3 181 54.1
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 3.1e-43 179.1 188 52.1
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.2e-42 177.2 184 54.9
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 2.6e-42 176.0 134 63.4
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.0e-41 174.1 190 50.5
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 3.8e-41 172.2 110 74.5
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 5.0e-41 171.8 115 69.6
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 6.5e-41 171.4 122 63.1
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 8.5e-41 171.0 188 51.1
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.0e-38 164.1 182 47.3
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 3.0e-38 162.5 167 53.3
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 5.1e-38 161.8 195 46.7
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 6.7e-38 161.4 167 53.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.3e-36 157.1 164 50.6
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 6.3e-36 154.8 126 62.7
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 8.2e-36 154.5 181 47.5
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.3e-33 147.1 182 45.1
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 3.6e-31 139.0 177 45.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 6.1e-31 138.3 77 81.8
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 7.9e-31 137.9 90 71.1
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 7.4e-29 131.3 183 42.6
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 6.3e-28 128.3 184 44.6
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.1e-27 125.6 89 61.8
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 9.1e-27 124.4 99 58.6
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 6.1e-23 111.7 128 53.9
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 4.0e-22 109.0 64 76.6
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 6.7e-22 108.2 112 56.2
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 8.5e-17 91.3 164 33.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.5e-16 90.5 109 40.4
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 1.6e-15 87.0 125 38.4
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.7e-12 77.0 115 34.8
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.0e-10 70.1 89 49.4
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 4.5e-10 68.9 95 46.3
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 3.8e-09 65.9 101 45.5
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 5.0e-09 65.5 45 68.9
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 1.4e-06 57.4 39 71.8
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 8.8e-06 54.7 38 65.8


User provided reference genes

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