Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.3e-227 792.7 401 100.0
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 1.6e-140 503.4 394 66.5
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.0e-139 500.7 403 64.5
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 6.6e-139 498.0 404 65.8
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 6.4e-134 481.5 396 65.2
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 1.1e-133 480.7 411 62.8
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 1.8e-133 479.9 404 62.6
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 7.0e-133 478.0 400 63.5
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 1.7e-131 473.4 401 61.3
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 6.6e-131 471.5 401 61.1
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 1.1e-130 470.7 411 59.1
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 4.7e-129 465.3 350 66.3
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 6.2e-129 464.9 419 58.9
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 2.3e-128 463.0 412 58.3
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 6.8e-128 461.5 403 58.8
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 1.5e-127 460.3 403 59.3
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.8e-127 458.4 400 62.0
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 7.5e-127 458.0 321 69.8
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 9.8e-127 457.6 345 65.8
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 4.9e-126 455.3 406 59.6
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 1.4e-125 453.8 394 60.7
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 1.9e-125 453.4 321 72.3
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 2.7e-124 449.5 325 66.5
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 2.3e-123 446.4 388 60.3
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.3e-123 446.4 405 61.2
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 5.0e-123 445.3 375 61.9
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.5e-122 443.7 409 56.0
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 7.3e-122 441.4 312 68.3
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 9.5e-122 441.0 338 65.4
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 4.7e-121 438.7 316 67.4
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 4.7e-121 438.7 312 67.9
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 4.7e-121 438.7 346 63.0
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 8.1e-121 438.0 343 63.3
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.1e-120 437.6 324 63.9
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 1.1e-120 437.6 307 70.4
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 2.3e-120 436.4 403 56.3
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 4.0e-120 435.6 321 67.0
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 4.0e-120 435.6 317 68.1
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 4.0e-120 435.6 317 67.5
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 6.8e-120 434.9 400 57.0
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.2e-119 434.1 394 57.1
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.0e-119 433.3 347 66.3
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.3e-118 430.6 392 56.9
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.3e-118 430.6 309 65.0
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 1.7e-118 430.3 306 68.3
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 2.9e-118 429.5 318 63.2
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 2.9e-118 429.5 309 67.3
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 4.9e-118 428.7 318 63.8
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 8.3e-118 427.9 414 52.9
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 8.3e-118 427.9 328 61.6
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.1e-117 427.6 337 60.2
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 1.4e-117 427.2 394 55.1
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.9e-117 426.8 324 62.3
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 9.2e-117 424.5 394 54.6
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 9.2e-117 424.5 337 60.2
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.2e-116 424.1 318 63.2
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 1.2e-116 424.1 384 56.2
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.1e-116 423.3 400 56.2
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 2.7e-116 422.9 312 66.3
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 7.8e-116 421.4 396 55.8
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 1.0e-115 421.0 318 62.9
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 1.0e-115 421.0 318 62.9
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 1.0e-115 421.0 318 62.9
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 5.1e-115 418.7 387 55.0
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 6.6e-115 418.3 399 54.9
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.6e-115 417.9 411 51.8
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.5e-114 417.2 409 54.0
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 7.3e-114 414.8 323 61.9
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 7.3e-114 414.8 305 62.6
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 9.5e-114 414.5 327 61.8
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 9.5e-114 414.5 459 51.0
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.2e-113 414.1 411 51.8
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.6e-113 413.7 393 53.7
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.8e-113 412.9 314 61.5
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 4.7e-113 412.1 404 54.2
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 1.1e-112 411.0 319 61.8
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 3.1e-112 409.5 319 61.8
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 4.0e-112 409.1 335 60.3
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 5.2e-112 408.7 308 64.9
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.2e-111 407.5 308 64.9
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.5e-111 407.1 410 52.4
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 4.1e-109 399.1 341 56.9
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 7.1e-109 398.3 395 52.2
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 3.0e-107 392.9 394 51.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 3.9e-107 392.5 321 60.7
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 8.6e-107 391.3 302 61.6
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.6e-107 391.3 334 61.7
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 4.7e-105 385.6 321 60.7
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.4e-104 384.0 230 82.6
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 4.0e-104 382.5 415 49.6
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 2.9e-102 376.3 410 51.0
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.2e-100 370.9 320 56.6
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.6e-100 370.5 329 59.3
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.7e-100 369.8 328 55.5
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 1.0e-99 367.9 334 54.8
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 2.3e-99 366.7 340 58.5
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 3.0e-99 366.3 317 57.1
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 1.3e-97 360.9 320 53.1
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 4.8e-97 359.0 324 55.6
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 8.1e-97 358.2 323 58.8
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.8e-96 357.1 318 56.6
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 2.9e-94 349.7 322 55.3
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 3.8e-94 349.4 326 54.0
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 1.0e-91 341.3 414 48.1
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 3.0e-83 313.2 299 53.5
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 2.5e-82 310.1 334 49.7
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 7.4e-82 308.5 267 57.7
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 5.8e-79 298.9 278 57.9
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 2.9e-78 296.6 283 56.5
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 3.5e-76 289.7 234 59.4
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 5.3e-72 275.8 289 50.2
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 5.3e-72 275.8 326 47.9
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 9.0e-72 275.0 279 52.0
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 9.7e-58 228.4 133 87.2
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 1.4e-56 224.6 353 40.8
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 1.8e-51 207.6 189 56.1
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 2.0e-50 204.1 267 41.9
Eucgr.H03799 Eucalyptus grandis HOM05D005247 ORTHO05D006571 7.2e-45 185.7 112 85.7
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 4.5e-39 166.4 181 47.0
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 1.0e-38 165.2 301 31.6
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.3e-38 164.9 312 32.7
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 6.5e-38 162.5 125 64.8
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 1.1e-37 161.8 123 61.8
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.6e-36 156.8 95 85.3
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 1.4e-35 154.8 179 46.9
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 3.5e-31 140.2 150 48.0
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.8e-30 136.7 69 94.2
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 9.5e-29 132.1 102 68.6
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 6.3e-25 119.4 213 35.2
Eucgr.H03798 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.2e-23 115.2 61 93.4
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 4.5e-23 113.2 247 28.7
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 6.6e-22 109.4 111 48.6
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 6.6e-22 109.4 322 25.2
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.1e-21 108.6 93 61.3
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 7.3e-21 105.9 158 42.4
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 1.2e-20 105.1 76 65.8
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.5e-15 87.0 72 66.7
Eucgr.H03758 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.9e-13 81.3 40 90.0
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 1.1e-11 75.5 72 51.4
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 8.9e-11 72.4 313 21.7
Hund28065 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.0e-06 57.4 103 34.0
Hund28074 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.0e-06 57.4 103 34.0


User provided reference genes

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