Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03772 Eucalyptus grandis HOM05D001151 ORTHO05D001504 8.1e-75 283.9 168 100.0
PGR004G2765 Punica granatum HOM05D001151 ORTHO05D001504 1.5e-20 103.6 136 57.4
Eucgr.B01267 Eucalyptus grandis HOM05D001151 ORTHO05D001504 2.7e-17 92.8 133 54.1
CiPaw.01G152600 Carya illinoinensis HOM05D001151 ORTHO05D001504 8.6e-16 87.8 133 50.4
FAN22G1580 Fragaria x ananassa HOM05D001151 ORTHO05D001504 2.5e-15 86.3 134 50.0
Manes.15G016400 Manihot esculenta HOM05D001151 ORTHO05D001504 5.6e-15 85.1 121 50.4
TWI53G0843 Tripterygium wilfordii HOM05D001151 ORTHO05D001504 1.2e-14 84.0 125 51.2
COL.COLO4_13923 Corchorus olitorius HOM05D001151 ORTHO05D001504 6.1e-14 81.6 130 49.2
Duzib151G0042 Durio zibethinus HOM05D001151 ORTHO05D001504 8.0e-14 81.3 119 51.3
Duzib212G0620 Durio zibethinus HOM05D001151 ORTHO05D001504 2.3e-13 79.7 126 50.0
Gorai.005G057400 Gossypium raimondii HOM05D001151 ORTHO05D001504 5.2e-13 78.6 132 44.7
CANSAT78G1982 Cannabis sativa HOM05D001151 ORTHO05D001504 6.8e-13 78.2 139 44.6
Cfa015348 Carpinus fangiana HOM05D001151 ORTHO05D001504 8.9e-13 77.8 111 52.3
Ciclev10005986m.g Citrus clementina HOM05D001151 ORTHO05D001504 1.2e-12 77.4 90 55.6
FvH4_4g17250 Fragaria vesca HOM05D001151 ORTHO05D001504 1.2e-12 77.4 131 46.6
FAN12G3527 Fragaria x ananassa HOM05D001151 ORTHO05D001504 1.2e-12 77.4 131 46.6
Gohir.D02G052100 Gossypium hirsutum HOM05D001151 ORTHO05D001504 1.2e-12 77.4 132 43.9
Dinv38321 Davidia involucrata HOM05D001151 ORTHO05D001504 3.4e-12 75.9 118 47.5
Gohir.A02G046400 Gossypium hirsutum HOM05D001151 ORTHO05D001504 3.4e-12 75.9 132 42.4
RcHm_v2.0_Chr4g0421171 Rosa chinensis HOM05D001151 ORTHO05D001504 1.7e-11 73.6 136 46.3
Thecc.04G278200 Theobroma cacao HOM05D001151 ORTHO05D001504 1.7e-11 73.6 122 50.0
Lj4g0006946 Lotus japonicus HOM05D001151 ORTHO05D001504 2.2e-11 73.2 131 44.3
Sabra08G0157000 Salix brachista HOM05D001151 ORTHO05D001504 2.9e-11 72.8 122 42.6
TWI09G1149 Tripterygium wilfordii HOM05D001151 ORTHO05D001504 2.9e-11 72.8 93 52.7
TWI09G1310 Tripterygium wilfordii HOM05D001151 ORTHO05D001504 2.9e-11 72.8 93 52.7
Prupe.1G141700 Prunus persica HOM05D001151 ORTHO05D001504 8.3e-11 71.2 92 54.3
Actinidia40227 Actinidia chinensis HOM05D001151 ORTHO05D001504 1.8e-10 70.1 126 44.4
Potri.008G205000 Populus trichocarpa HOM05D001151 ORTHO05D001504 2.4e-10 69.7 118 44.1
QL06p007531 Quercus lobata HOM05D001151 ORTHO05D001504 2.4e-10 69.7 90 54.4
BcaC05g30031 Brassica carinata HOM05D001151 ORTHO05D001504 3.2e-10 69.3 126 41.3
TAR362G1028 Trochodendron aralioides HOM05D001151 ORTHO05D001504 4.1e-10 68.9 121 47.1
AT3G06390 Arabidopsis thaliana HOM05D001151 ORTHO05D001504 5.4e-10 68.6 125 42.4
Actinidia00049 Actinidia chinensis HOM05D001151 ORTHO05D001504 7.0e-10 68.2 108 46.3
Rhsim04G0216700 Rhododendron simsii HOM05D001151 ORTHO05D001504 9.2e-10 67.8 105 48.6
THA.LOC104820241 Tarenaya hassleriana HOM05D001151 ORTHO05D001504 9.2e-10 67.8 113 43.4
A05p41640 Brassica napus HOM05D001151 ORTHO05D001504 1.2e-09 67.4 129 41.9
BraA05t22883Z Brassica rapa HOM05D001151 ORTHO05D001504 1.2e-09 67.4 129 41.9
Thhalv10021548m.g Eutrema salsugineum HOM05D001151 ORTHO05D001504 2.0e-09 66.6 127 43.3
Lj6A670T85 Lonicera japonica HOM05D001151 ORTHO05D001504 2.0e-09 66.6 91 52.7
MD16G1174700 Malus domestica HOM05D001151 ORTHO05D001504 2.0e-09 66.6 131 42.7
ClCG05G005810 Citrullus lanatus HOM05D001151 ORTHO05D001504 2.7e-09 66.2 124 41.9
Nn4g26011 Nelumbo nucifera HOM05D001151 ORTHO05D001504 2.7e-09 66.2 93 49.5
MSTRG.21812 Avicennia marina HOM05D001151 ORTHO05D001504 3.5e-09 65.9 129 41.9
C05p60850 Brassica napus HOM05D001151 ORTHO05D001504 3.5e-09 65.9 130 40.8
Hma1.2p1_0078F.1_g040790 Hydrangea macrophylla HOM05D001151 ORTHO05D001504 3.5e-09 65.9 93 49.5
LjContig00389g0013761 Lotus japonicus HOM05D001151 ORTHO05D001504 3.5e-09 65.9 90 51.1
Actinidia14319 Actinidia chinensis HOM05D001151 ORTHO05D001504 4.6e-09 65.5 92 46.7
CSS0011260 Camellia sinensis var. sinensis HOM05D001151 ORTHO05D001504 4.6e-09 65.5 90 50.0
Dinv44424 Davidia involucrata HOM05D000611 ORTHO05D000809 4.6e-09 65.5 91 51.6
Carub.0007s2620 Capsella rubella HOM05D001151 ORTHO05D001504 7.8e-09 64.7 92 51.1
Nitab4.5_0000829g0040 Nicotiana tabacum HOM05D001151 ORTHO05D001504 7.8e-09 64.7 132 40.9
AL3G17340 Arabidopsis lyrata HOM05D001151 ORTHO05D001504 1.0e-08 64.3 123 39.0
CARHR290010 Cardamine hirsuta HOM05D001151 ORTHO05D001504 1.0e-08 64.3 90 48.9
HanXRQChr03g0080161 Helianthus annuus HOM05D001151 ORTHO05D001504 1.0e-08 64.3 107 43.9
Ca_21548_v3 Cicer arietinum L. HOM05D001151 ORTHO05D001504 1.3e-08 63.9 90 47.8
DCAR_024610 Daucus carota HOM05D001151 ORTHO05D001504 1.3e-08 63.9 91 47.3
HanXRQChr13g0410881 Helianthus annuus HOM05D001151 ORTHO05D001504 1.3e-08 63.9 91 47.3
SHI00298 Sapria himalayana HOM05D001151 ORTHO05D001504 1.3e-08 63.9 98 41.8
THA.LOC104818843 Tarenaya hassleriana HOM05D001151 ORTHO05D001504 1.3e-08 63.9 126 41.3
DCAR_024545 Daucus carota HOM05D001151 ORTHO05D001504 1.7e-08 63.5 91 48.4
Gohir.A09G233500 Gossypium hirsutum HOM05D001151 ORTHO05D001504 1.7e-08 63.5 97 47.4
AUR62041204 Chenopodium quinoa HOM05D001151 ORTHO05D001504 2.3e-08 63.2 119 45.4
HanXRQChr12g0366261 Helianthus annuus HOM05D001151 ORTHO05D001504 2.3e-08 63.2 91 50.5
BcaC05g29813 Brassica carinata HOM05D001151 ORTHO05D001504 3.0e-08 62.8 130 40.0
BolC5t34742H Brassica oleracea HOM05D001151 ORTHO05D001504 3.0e-08 62.8 130 40.0
Migut.G00205 Erythranthe guttata HOM05D001151 ORTHO05D001504 3.0e-08 62.8 121 43.8
Lalb_Chr07g0177571 Lupinus albus HOM05D001151 ORTHO05D001504 3.0e-08 62.8 95 46.3
Sp3g05310 Schrenkiella parvula HOM05D001151 ORTHO05D001504 3.0e-08 62.8 129 41.9
VMungo0540G2050 Vigna mungo HOM05D001151 ORTHO05D001504 3.0e-08 62.8 106 44.3
DCAR_024546 Daucus carota HOM05D001151 ORTHO05D001504 3.9e-08 62.4 91 49.5
Sc13g0003590 Simmondsia chinensis HOM05D001151 ORTHO05D001504 3.9e-08 62.4 124 46.0
Aa31LG5G16910 Aethionema arabicum HOM05D001151 ORTHO05D001504 6.6e-08 61.6 127 40.2
AL7G39840 Arabidopsis lyrata HOM05D001151 ORTHO05D001504 6.6e-08 61.6 90 46.7
BcaC06g33419 Brassica carinata HOM05D001151 ORTHO05D001504 8.6e-08 61.2 91 50.5
A03p49200 Brassica napus HOM05D001151 ORTHO05D001504 8.6e-08 61.2 91 50.5
BraA03t14019Z Brassica rapa HOM05D001151 ORTHO05D001504 8.6e-08 61.2 91 50.5
Gorai.006G257500 Gossypium raimondii HOM05D001151 ORTHO05D001504 8.6e-08 61.2 92 47.8
Phvul.006G161700 Phaseolus vulgaris HOM05D001151 ORTHO05D001504 8.6e-08 61.2 106 43.4
DCAR_024548 Daucus carota HOM05D001151 ORTHO05D001504 1.1e-07 60.8 97 45.4
Oeu021625.1 Olea europaea HOM05D001151 ORTHO05D001504 1.1e-07 60.8 122 43.4
HPP92_010733 Vanilla planifolia HOM05D001151 ORTHO05D001504 1.5e-07 60.5 122 41.0
AT4G15610 Arabidopsis thaliana HOM05D001151 ORTHO05D001504 1.9e-07 60.1 90 45.6
CiPaw.02G086200 Carya illinoinensis HOM05D001151 ORTHO05D001504 1.9e-07 60.1 132 42.4
Nn3g21312 Nelumbo nucifera HOM05D001151 ORTHO05D001504 1.9e-07 60.1 130 43.1
BcaC06g32947 Brassica carinata HOM05D001151 ORTHO05D001504 2.5e-07 59.7 92 48.9
Gohir.D09G234600 Gossypium hirsutum HOM05D001151 ORTHO05D001504 3.3e-07 59.3 92 46.7
MSTRG.10059 Avicennia marina HOM05D001151 ORTHO05D001504 4.3e-07 58.9 123 43.9
CARHR080920 Cardamine hirsuta HOM05D001151 ORTHO05D001504 5.6e-07 58.5 128 39.8
Glyma.13G215500 Glycine max HOM05D001151 ORTHO05D001504 5.6e-07 58.5 128 40.6
CSS0017094 Camellia sinensis var. sinensis HOM05D001151 ORTHO05D001504 7.3e-07 58.2 128 40.6
DCAR_002445 Daucus carota HOM05D001151 ORTHO05D001504 7.3e-07 58.2 127 43.3
Thhalv10026308m.g Eutrema salsugineum HOM05D001151 ORTHO05D001504 7.3e-07 58.2 91 47.3
HanXRQChr03g0080171 Helianthus annuus HOM05D001151 ORTHO05D001504 9.5e-07 57.8 124 40.3
Lalb_Chr13g0303861 Lupinus albus HOM05D001151 ORTHO05D001504 9.5e-07 57.8 131 39.7
Sed0001505 Sechium edule HOM05D001151 ORTHO05D001504 9.5e-07 57.8 125 40.8
Os07g0442900 Oryza sativa ssp. japonica HOM05D001151 ORTHO05D001504 1.2e-06 57.4 93 41.9
SGA_v2.0_scaffold86G26832 Striga asiatica HOM05D001151 ORTHO05D001504 1.2e-06 57.4 107 43.0
Psat4g030520 Pisum sativum HOM05D001151 ORTHO05D001504 1.6e-06 57.0 107 43.9
Sopen01g029100 Solanum pennellii HOM05D001151 ORTHO05D001504 1.6e-06 57.0 120 40.8
Atru.chr4.2759 Acer truncatum HOM05D001151 ORTHO05D001504 2.1e-06 56.6 115 45.2
CsaV3_3G014160 Cucumis sativus L. HOM05D001151 ORTHO05D001504 2.8e-06 56.2 122 39.3
Oeu026200.1 Olea europaea HOM05D001151 ORTHO05D001504 2.8e-06 56.2 124 41.9
PGSC0003DMG400022659 Solanum tuberosum HOM05D001151 ORTHO05D001504 2.8e-06 56.2 132 40.2
Glyma.07G251300 Glycine max HOM05D001151 ORTHO05D001504 3.6e-06 55.8 118 40.7
MD13G1173500 Malus domestica HOM05D001151 ORTHO05D001504 3.6e-06 55.8 133 41.4
TPR.G14964 Trifolium pratense HOM05D001151 ORTHO05D001504 3.6e-06 55.8 113 40.7
VMungo1215G0580 Vigna mungo HOM05D001151 ORTHO05D001504 3.6e-06 55.8 131 36.6
Hund20579 Selenicereus undatus HOM05D001151 ORTHO05D001504 4.7e-06 55.5 91 41.8
DCAR_024605 Daucus carota HOM05D001151 ORTHO05D001504 6.2e-06 55.1 83 47.0
Glyma.17G023000 Glycine max HOM05D001151 ORTHO05D001504 6.2e-06 55.1 105 41.9
Lsat_1_v5_gn_5_50161 Lactuca sativa HOM05D001151 ORTHO05D001504 6.2e-06 55.1 121 40.5
Peaxi162Scf00386g00921 Petunia axillaris HOM05D001151 ORTHO05D001504 8.0e-06 54.7 133 39.1


User provided reference genes

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