Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.1e-136 487.6 232 100.0
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.2e-106 388.7 230 82.6
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 6.1e-89 331.3 228 70.2
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 1.0e-88 330.5 230 70.0
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 1.8e-88 329.7 230 68.7
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 2.9e-86 322.4 230 65.2
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 6.4e-86 321.2 231 67.5
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 1.4e-85 320.1 230 66.5
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.5e-84 315.5 229 67.2
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.9e-84 314.7 229 66.4
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 7.8e-84 314.3 230 63.5
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.3e-83 313.5 230 63.0
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 1.7e-83 313.2 230 63.0
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 2.3e-83 312.8 230 64.3
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 3.0e-83 312.4 230 61.7
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 3.0e-83 312.4 231 64.1
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 3.0e-83 312.4 229 66.4
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 5.0e-83 311.6 228 65.8
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 1.9e-82 309.7 230 63.0
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.5e-82 309.3 229 64.2
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 3.3e-82 308.9 230 63.5
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 5.6e-82 308.1 230 62.6
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 7.3e-82 307.8 230 63.5
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.6e-81 306.6 229 62.4
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 6.2e-81 304.7 231 63.2
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 8.0e-81 304.3 230 63.0
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 1.1e-80 303.9 230 63.9
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 1.4e-80 303.5 230 63.9
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 1.4e-80 303.5 230 63.0
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 2.3e-80 302.8 226 63.7
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 3.1e-80 302.4 230 64.3
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 3.1e-80 302.4 230 62.2
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 4.0e-80 302.0 230 63.5
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 5.2e-80 301.6 227 61.7
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 8.9e-80 300.8 228 61.4
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.9e-80 300.8 255 59.6
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 8.9e-80 300.8 230 63.9
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.2e-79 300.4 236 59.7
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 3.4e-79 298.9 230 62.6
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 3.4e-79 298.9 230 62.2
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 5.8e-79 298.1 230 61.7
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 7.5e-79 297.7 229 61.1
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 9.8e-79 297.4 229 61.6
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 9.8e-79 297.4 230 63.5
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.7e-78 296.6 228 61.4
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.7e-78 296.6 227 62.1
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 2.2e-78 296.2 231 62.3
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 2.9e-78 295.8 229 60.7
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 3.7e-78 295.4 230 58.7
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 6.4e-78 294.7 229 59.0
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 6.4e-78 294.7 229 60.3
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 2.4e-77 292.7 228 60.5
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.4e-77 292.7 229 63.3
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 3.2e-77 292.4 231 61.5
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 4.1e-77 292.0 236 60.6
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 4.1e-77 292.0 230 61.7
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 4.1e-77 292.0 229 59.8
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 4.1e-77 292.0 228 58.8
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 4.1e-77 292.0 228 60.1
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 7.0e-77 291.2 230 60.9
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 9.2e-77 290.8 229 61.1
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.2e-76 290.4 230 57.4
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.6e-76 290.0 254 55.1
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 2.0e-76 289.7 230 60.9
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.0e-76 289.7 229 62.0
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 1.0e-75 287.3 230 61.3
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.7e-75 286.6 230 57.4
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 2.3e-75 286.2 205 63.9
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 5.0e-75 285.0 229 59.0
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 5.0e-75 285.0 229 59.0
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 5.0e-75 285.0 229 59.4
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 6.6e-75 284.6 229 58.5
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 6.6e-75 284.6 230 59.6
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 1.1e-74 283.9 229 58.5
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 1.1e-74 283.9 229 58.5
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 1.1e-74 283.9 229 58.5
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.5e-74 283.5 230 56.5
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.5e-74 283.5 230 56.1
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 1.9e-74 283.1 230 57.8
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.5e-74 282.7 230 55.7
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 3.3e-74 282.3 229 58.5
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 3.3e-74 282.3 230 57.0
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 7.3e-74 281.2 235 57.9
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 1.2e-73 280.4 272 52.2
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.1e-72 277.3 230 56.5
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 1.8e-72 276.6 230 57.8
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 4.0e-72 275.4 230 60.0
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 5.2e-72 275.0 231 58.9
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.2e-72 275.0 234 58.1
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 6.8e-72 274.6 231 57.6
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 8.3e-70 267.7 231 55.0
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 1.1e-69 267.3 235 55.7
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 2.4e-69 266.2 228 55.7
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 7.1e-69 264.6 230 55.7
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 7.1e-69 264.6 253 51.8
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.6e-68 263.5 230 53.0
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 5.1e-67 258.5 229 50.2
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 8.6e-67 257.7 228 53.1
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.1e-66 257.3 229 55.0
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.9e-66 256.5 230 52.2
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 2.5e-66 256.1 227 52.4
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.8e-64 250.0 233 52.4
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 5.2e-64 248.4 204 56.9
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 5.8e-63 245.0 246 49.6
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 3.8e-62 242.3 241 52.3
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 8.4e-62 241.1 230 50.9
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 1.9e-61 240.0 208 54.8
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 1.0e-59 234.2 177 61.0
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 1.3e-59 233.8 177 63.3
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 1.3e-59 233.8 179 61.5
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.2e-53 212.6 163 60.7
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 7.1e-53 211.5 257 45.1
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.6e-51 204.9 122 82.0
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 1.1e-48 197.6 220 48.2
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 3.2e-45 186.0 221 44.3
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 1.5e-42 177.2 177 50.8
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 6.2e-41 171.8 223 44.4
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 7.1e-37 158.3 115 64.3
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.7e-30 137.1 69 89.9
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 3.5e-28 129.4 103 56.3
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 6.7e-27 125.2 223 31.4
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 8.7e-27 124.8 207 31.4
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 2.6e-23 113.2 144 40.3
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 5.0e-22 109.0 76 65.8
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 1.2e-20 104.4 176 36.9
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 6.1e-20 102.1 156 39.1
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 9.1e-16 88.2 99 47.5
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 5.9e-15 85.5 240 25.0
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 2.2e-14 83.6 204 26.5
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 6.5e-14 82.0 69 63.8
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 1.6e-12 77.4 52 69.2
Eucgr.H03758 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.4e-07 59.7 35 77.1
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 3.4e-07 59.7 167 24.6


User provided reference genes

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