Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.1e-34 147.9 74 100.0
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.5e-33 145.6 74 98.6
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-28 127.5 74 81.1
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-28 127.5 74 81.1
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 7.3e-28 126.7 74 81.1
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 84.7
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.1e-27 125.2 74 79.7
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 3.6e-27 124.4 72 81.9
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 6.2e-27 123.6 72 81.9
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.4e-26 122.5 72 80.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.8e-26 122.1 71 78.9
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 2.4e-26 121.7 72 81.9
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 3.1e-26 121.3 72 80.6
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.3e-26 120.6 72 80.6
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 72 79.2
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 5.3e-26 120.6 72 81.9
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 81.9
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 81.9
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.2e-25 119.4 71 76.1
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 80.6
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 80.6
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-25 119.4 74 77.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-25 119.4 74 77.0
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 80.6
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 80.6
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 80.6
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 80.6
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 76.4
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 80.6
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.0e-25 118.6 74 79.7
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 80.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 77.8
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 79.2
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 79.2
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 76.4
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 76.4
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.6e-25 118.2 74 78.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.6e-25 118.2 74 78.4
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 3.4e-25 117.9 72 81.9
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 4.4e-25 117.5 71 76.1
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 5.8e-25 117.1 72 76.4
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 79.2
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 7.6e-25 116.7 70 74.3
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 79.2
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 75.0
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.7e-24 115.5 68 79.4
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.7e-24 115.5 68 79.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 2.9e-24 114.8 68 77.9
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 2.9e-24 114.8 69 76.8
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.8e-24 114.4 70 75.7
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 3.8e-24 114.4 68 77.9
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 3.8e-24 114.4 68 77.9
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 3.8e-24 114.4 71 74.6
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 4.9e-24 114.0 72 77.8
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 6.4e-24 113.6 72 72.2
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 6.4e-24 113.6 72 76.4
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 6.4e-24 113.6 69 75.4
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.1e-23 112.8 73 75.3
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.4e-23 112.5 71 71.8
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 76.4
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.4e-23 112.5 73 79.5
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.4e-23 112.5 66 77.3
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 2.4e-23 111.7 71 71.8
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 3.2e-23 111.3 72 73.6
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 5.4e-23 110.5 82 68.3
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 9.3e-23 109.8 68 77.9
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.2e-22 109.4 74 70.3
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 2.7e-22 108.2 71 78.9
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 3.5e-22 107.8 85 69.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 7.8e-22 106.7 64 81.2
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 7.8e-22 106.7 75 72.0
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.0e-21 106.3 67 71.6
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.9e-21 104.4 68 72.1
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 6.6e-21 103.6 69 71.0
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 8.7e-21 103.2 82 64.6
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 4.3e-20 100.9 72 73.6
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 5.6e-20 100.5 70 72.9
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 7.3e-20 100.1 72 70.8
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.3e-19 99.4 69 66.7
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.6e-19 99.0 61 75.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 8.1e-19 96.7 101 53.5
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 8.1e-19 96.7 69 63.8
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 2.4e-18 95.1 72 61.1
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.2e-17 92.8 72 68.1
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.5e-17 92.4 137 43.1
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.0e-17 92.0 131 44.3
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.6e-17 91.7 52 86.5
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 4.5e-17 90.9 63 66.7
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.9e-16 88.2 70 64.3
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.4e-16 87.0 52 76.9
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.9e-15 85.5 42 100.0
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 1.9e-15 85.5 70 55.7
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 5.1e-13 77.4 50 76.0
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.9e-12 75.5 42 83.3
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 3.3e-12 74.7 68 57.4
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 8.1e-11 70.1 60 60.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 8.1e-11 70.1 166 31.9
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.1e-10 69.7 41 80.5
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.8e-10 68.9 39 79.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 5.3e-10 67.4 42 76.2
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 6.9e-10 67.0 42 76.2
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 6.9e-10 67.0 42 78.6
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 2.0e-09 65.5 52 59.6
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.6e-09 65.1 39 76.9
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 7.6e-09 63.5 42 76.2
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 1.7e-08 62.4 35 77.1
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.9e-08 60.8 41 73.2
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.4e-07 59.3 36 77.8
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 1.9e-07 58.9 37 78.4
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 2.5e-07 58.5 56 50.0
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 7.1e-07 57.0 32 84.4
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 2.1e-06 55.5 31 77.4
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 6.0e-06 53.9 40 60.0
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 7.9e-06 53.5 32 75.0


User provided reference genes

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