Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03703 Eucalyptus grandis HOM05D004181 ORTHO05D005610 9.5e-53 209.9 107 100.0
Eucgr.H03684 Eucalyptus grandis HOM05D004181 ORTHO05D005610 1.3e-49 199.5 107 96.3
Eucgr.H03477 Eucalyptus grandis HOM05D004181 ORTHO05D005610 1.2e-39 166.4 107 82.2
Eucgr.H03732 Eucalyptus grandis HOM05D004181 ORTHO05D005610 2.3e-38 162.2 107 82.2
Eucgr.H03714 Eucalyptus grandis HOM05D004181 ORTHO05D005610 8.4e-33 143.7 102 76.5
Potri.010G031800 Populus trichocarpa HOM05D004181 ORTHO05D005610 1.9e-29 132.5 102 67.6
Manes.15G017750 Manihot esculenta HOM05D004181 ORTHO05D005610 4.3e-29 131.3 102 66.7
TAR633G0339 Trochodendron aralioides HOM05D004181 ORTHO05D005610 7.3e-29 130.6 102 67.6
Sabra08G0148900 Salix brachista HOM05D004181 ORTHO05D005610 1.3e-28 129.8 102 65.7
Manes.03G190400 Manihot esculenta HOM05D004181 ORTHO05D005610 1.6e-28 129.4 102 66.7
Cfa015503 Carpinus fangiana HOM05D004181 ORTHO05D005610 3.6e-28 128.3 102 64.7
Haze_01049 Corylus avellana HOM05D004181 ORTHO05D005610 3.6e-28 128.3 102 64.7
QL12p038326 Quercus lobata HOM05D004181 ORTHO05D005610 3.6e-28 128.3 102 64.7
Potri.008G195800 Populus trichocarpa HOM05D004181 ORTHO05D005610 4.8e-28 127.9 102 65.7
CiPaw.01G154000 Carya illinoinensis HOM05D004181 ORTHO05D005610 6.2e-28 127.5 102 64.7
QL06p007241 Quercus lobata HOM05D004181 ORTHO05D005610 6.2e-28 127.5 102 65.7
CANSAT78G2156 Cannabis sativa HOM05D004181 ORTHO05D005610 8.1e-28 127.1 102 65.7
CSS0009092 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 1.1e-27 126.7 102 63.7
Aqoxy5G00623 Aquilegia oxysepala HOM05D004181 ORTHO05D005610 6.9e-27 124.0 102 65.7
Gohir.A10G101825 Gossypium hirsutum HOM05D004181 ORTHO05D005610 9.0e-27 123.6 102 64.7
CSS0036329 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 1.2e-26 123.2 102 62.7
MELO3C006602.2 Cucumis melo HOM05D004181 ORTHO05D005610 1.5e-26 122.9 102 63.7
CsaV3_3G014080 Cucumis sativus L. HOM05D004181 ORTHO05D005610 1.5e-26 122.9 102 63.7
Cpa.g.sc16.105 Carica papaya HOM05D004181 ORTHO05D005610 2.0e-26 122.5 102 63.7
ClCG05G005760 Citrullus lanatus HOM05D004181 ORTHO05D005610 2.0e-26 122.5 102 62.7
Ciclev10004155m.g Citrus clementina HOM05D004181 ORTHO05D005610 2.0e-26 122.5 102 63.7
Prupe.1G143100 Prunus persica HOM05D004181 ORTHO05D005610 2.0e-26 122.5 102 63.7
Dinv44435 Davidia involucrata HOM05D004181 ORTHO05D005610 2.6e-26 122.1 102 61.8
Duzib151G0672 Durio zibethinus HOM05D004181 ORTHO05D005610 2.6e-26 122.1 102 63.7
FvH4_4g17050 Fragaria vesca HOM05D004181 ORTHO05D005610 2.6e-26 122.1 102 62.7
FAN07G0512 Fragaria x ananassa HOM05D004181 ORTHO05D005610 2.6e-26 122.1 102 62.7
FAN12G4244 Fragaria x ananassa HOM05D004181 ORTHO05D005610 2.6e-26 122.1 102 62.7
MD13G1174600 Malus domestica HOM05D004181 ORTHO05D005610 2.6e-26 122.1 102 62.7
FAN17G2769 Fragaria x ananassa HOM05D004181 ORTHO05D005610 3.4e-26 121.7 102 62.7
TWI09G1497 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 3.4e-26 121.7 102 62.7
PSO170G6249 Papaver somniferum HOM05D004181 ORTHO05D005610 4.5e-26 121.3 102 61.8
Sed0020769 Sechium edule HOM05D004181 ORTHO05D005610 4.5e-26 121.3 102 62.7
Sed0026329 Sechium edule HOM05D004181 ORTHO05D005610 4.5e-26 121.3 102 62.7
Sc13g0003660 Simmondsia chinensis HOM05D004181 ORTHO05D005610 4.5e-26 121.3 102 59.8
Thecc.04G276100 Theobroma cacao HOM05D004181 ORTHO05D005610 4.5e-26 121.3 102 64.7
BcaB08g36651 Brassica carinata HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
BcaC04g18651 Brassica carinata HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
A10p20860 Brassica napus HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
C09p57750 Brassica napus HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
BolC9t58645H Brassica oleracea HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
BraA10t44151Z Brassica rapa HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
Thhalv10012450m.g Eutrema salsugineum HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 62.7
Hund20614 Selenicereus undatus HOM05D004181 ORTHO05D005610 5.8e-26 120.9 102 61.8
Phvul.006G160500 Phaseolus vulgaris HOM05D004181 ORTHO05D005610 7.6e-26 120.6 101 60.4
RcHm_v2.0_Chr4g0420851 Rosa chinensis HOM05D004181 ORTHO05D005610 7.6e-26 120.6 102 61.8
TWI73G0666 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 7.6e-26 120.6 102 61.8
AUR62040385 Chenopodium quinoa HOM05D004181 ORTHO05D005610 9.9e-26 120.2 102 59.8
FAN22G0275 Fragaria x ananassa HOM05D004181 ORTHO05D005610 9.9e-26 120.2 102 61.8
AL6G29980 Arabidopsis lyrata HOM05D004181 ORTHO05D005610 1.3e-25 119.8 102 61.8
COL.COLO4_13939 Corchorus olitorius HOM05D004181 ORTHO05D005610 1.3e-25 119.8 102 62.7
Gorai.011G185300 Gossypium raimondii HOM05D004181 ORTHO05D005610 1.3e-25 119.8 102 63.7
Glyma.13G214400 Glycine max HOM05D004181 ORTHO05D005610 1.7e-25 119.4 101 61.4
Lalb_Chr18g0055771 Lupinus albus HOM05D004181 ORTHO05D005610 1.7e-25 119.4 101 60.4
Nn3g21283 Nelumbo nucifera HOM05D004181 ORTHO05D005610 1.7e-25 119.4 102 61.8
BolC3t13535H Brassica oleracea HOM05D004181 ORTHO05D005610 2.2e-25 119.0 102 62.7
CiPaw.02G087200 Carya illinoinensis HOM05D004181 ORTHO05D005610 2.2e-25 119.0 102 62.7
Gohir.D10G165800 Gossypium hirsutum HOM05D004181 ORTHO05D005610 2.2e-25 119.0 102 63.7
Sp6g25640 Schrenkiella parvula HOM05D004181 ORTHO05D005610 2.2e-25 119.0 102 61.8
Aa31LG11G10920 Aethionema arabicum HOM05D004181 ORTHO05D005610 2.9e-25 118.6 102 59.8
Migut.N00126 Erythranthe guttata HOM05D004181 ORTHO05D005610 2.9e-25 118.6 102 59.8
Glyma.15G098800 Glycine max HOM05D004181 ORTHO05D005610 2.9e-25 118.6 101 61.4
Lalb_Chr15g0087081 Lupinus albus HOM05D004181 ORTHO05D005610 2.9e-25 118.6 101 61.4
A03p09050 Brassica napus HOM05D004181 ORTHO05D005610 3.8e-25 118.2 102 62.7
C03p10540 Brassica napus HOM05D004181 ORTHO05D005610 3.8e-25 118.2 102 62.7
CARHR194300 Cardamine hirsuta HOM05D004181 ORTHO05D005610 3.8e-25 118.2 102 60.8
Ca_00581_v3 Cicer arietinum L. HOM05D004181 ORTHO05D005610 3.8e-25 118.2 101 61.4
FAN12G1830 Fragaria x ananassa HOM05D004181 ORTHO05D005610 3.8e-25 118.2 102 61.8
MD16G1176300 Malus domestica HOM05D004181 ORTHO05D005610 3.8e-25 118.2 102 61.8
Medtr2g020380 Medicago truncatula HOM05D004181 ORTHO05D005610 3.8e-25 118.2 101 61.4
LjContig00389g0007799 Lotus japonicus HOM05D004181 ORTHO05D005610 4.9e-25 117.9 101 60.4
Psat1g186920 Pisum sativum HOM05D004181 ORTHO05D005610 4.9e-25 117.9 101 60.4
TPR.G1487 Trifolium pratense HOM05D004181 ORTHO05D005610 4.9e-25 117.9 101 61.4
Carub.0006s1700 Capsella rubella HOM05D004181 ORTHO05D005610 6.4e-25 117.5 102 60.8
Gohir.D02G051700 Gossypium hirsutum HOM05D004181 ORTHO05D005610 8.4e-25 117.1 102 63.7
AT5G18700 Arabidopsis thaliana HOM05D004181 ORTHO05D005610 1.1e-24 116.7 102 60.8
AUR62040726 Chenopodium quinoa HOM05D004181 ORTHO05D005610 1.1e-24 116.7 102 57.8
Cc03_g12380 Coffea canephora HOM05D004181 ORTHO05D005610 2.4e-24 115.5 102 60.8
VMungo0540G0214 Vigna mungo HOM05D004181 ORTHO05D005610 2.4e-24 115.5 101 57.4
BraA03t10229Z Brassica rapa HOM05D004181 ORTHO05D005610 3.2e-24 115.2 102 61.8
arahy.Tifrunner.gnm1.ann1.6ZP27B Arachis hypogaea HOM05D004181 ORTHO05D005610 1.2e-23 113.2 101 59.4
SGA_v2.0_scaffold89G27558 Striga asiatica HOM05D004181 ORTHO05D005610 1.6e-23 112.8 102 56.9
HPP92_025279 Vanilla planifolia HOM05D004181 ORTHO05D005610 1.6e-23 112.8 102 58.8
Gohir.A02G045701 Gossypium hirsutum HOM05D004181 ORTHO05D005610 2.1e-23 112.5 102 61.8
Gorai.005G057000 Gossypium raimondii HOM05D004181 ORTHO05D005610 2.7e-23 112.1 102 62.7
Peaxi162Scf00058g01114 Petunia axillaris HOM05D004181 ORTHO05D005610 2.7e-23 112.1 102 56.9
EL10Ac3g06539 Beta vulgaris HOM05D004181 ORTHO05D005610 6.0e-23 110.9 102 56.9
CAN.G2005.1 Capsicum annuum HOM05D004181 ORTHO05D005610 7.9e-23 110.5 102 55.9
MSTRG.21818 Avicennia marina HOM05D004181 ORTHO05D005610 1.3e-22 109.8 102 55.9
Nitab4.5_0000242g0080 Nicotiana tabacum HOM05D004181 ORTHO05D005610 1.3e-22 109.8 102 54.9
Solyc08g013940.3 Solanum lycopersicum HOM05D004181 ORTHO05D005610 1.8e-22 109.4 102 54.9
Nitab4.5_0003641g0020 Nicotiana tabacum HOM05D004181 ORTHO05D005610 2.3e-22 109.0 102 53.9
SalBow5G0241 Salvia bowleyana HOM05D004181 ORTHO05D005610 2.3e-22 109.0 102 55.9
SalBow5G5345 Salvia bowleyana HOM05D004181 ORTHO05D005610 2.3e-22 109.0 102 55.9
Sopen08g004800 Solanum pennellii HOM05D004181 ORTHO05D005610 2.3e-22 109.0 102 54.9
CDE12G0304 Ceratophyllum demersum HOM05D004181 ORTHO05D005610 3.0e-22 108.6 101 55.4
Peaxi162Scf00075g01553 Petunia axillaris HOM05D004181 ORTHO05D005610 1.1e-21 106.7 102 53.9
Rhsim04G0215600 Rhododendron simsii HOM05D004181 ORTHO05D005610 1.1e-21 106.7 103 58.3
SHI00295 Sapria himalayana HOM05D004181 ORTHO05D005610 1.1e-21 106.7 102 55.9
Os01g0259400 Oryza sativa ssp. japonica HOM05D004181 ORTHO05D005610 1.9e-21 105.9 102 54.9
Zm00001eb333450 Zea mays HOM05D004181 ORTHO05D005610 3.3e-21 105.1 102 53.9
Zm00001eb127880 Zea mays HOM05D004181 ORTHO05D005610 9.6e-21 103.6 102 53.9
vmacro08213 Vaccinium macrocarpon HOM05D004181 ORTHO05D005610 1.6e-20 102.8 103 56.3
ATR0706G144 Amborella trichopoda HOM05D004181 ORTHO05D005610 6.9e-19 97.4 101 51.5
SEGI_19119 Sequoiadendron giganteum HOM05D004181 ORTHO05D005610 2.2e-17 92.4 101 50.5
Mapoly0072s0051 Marchantia polymorpha HOM05D004181 ORTHO05D005610 1.6e-15 86.3 102 48.0
AagrBONN_evm.TU.Sc2ySwM_117.2942 Anthoceros agrestis HOM05D004181 ORTHO05D005610 2.7e-15 85.5 102 47.1
Pp3c14_3850 Physcomitrium patens HOM05D004181 ORTHO05D005610 1.3e-14 83.2 102 40.2
Pp3c2_16690 Physcomitrium patens HOM05D004181 ORTHO05D005610 2.8e-12 75.5 102 38.2
GSVIVG01017819001 Vitis vinifera HOM05D004181 ORTHO05D005610 5.8e-10 67.8 102 42.2
CBR_g38144 Chara braunii HOM05D004181 ORTHO05D005610 4.9e-09 64.7 101 31.7


User provided reference genes

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