Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.8e-34 146.7 74 100.0
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.0e-33 145.2 74 98.6
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.9e-28 128.6 74 82.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.9e-28 128.6 74 82.4
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 3.3e-28 127.9 74 82.4
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 7.3e-28 126.7 72 86.1
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 9.6e-28 126.3 74 81.1
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 83.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.8e-27 124.8 72 83.3
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 6.2e-27 123.6 72 81.9
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.1e-26 122.9 72 83.3
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.4e-26 121.7 72 83.3
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 5.3e-26 120.6 71 77.5
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 72 81.9
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 72 79.2
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 81.9
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 81.9
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 81.9
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 81.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 79.2
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 9.0e-26 119.8 72 81.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.0e-26 119.8 74 81.1
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 80.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.2e-25 119.4 71 77.5
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 77.8
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 77.8
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 76.4
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 79.2
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 77.8
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 77.8
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.6e-25 118.2 74 78.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.6e-25 118.2 74 78.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 3.4e-25 117.9 70 75.7
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.4e-25 117.9 72 79.2
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.4e-25 117.9 72 76.4
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 4.4e-25 117.5 72 80.6
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 4.4e-25 117.5 72 80.6
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 79.2
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 79.2
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.6e-25 116.7 74 75.7
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.6e-25 116.7 74 75.7
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.3e-24 115.9 68 79.4
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.3e-24 115.9 69 78.3
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 79.2
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.7e-24 115.5 70 77.1
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.7e-24 115.5 68 79.4
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.7e-24 115.5 68 79.4
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.7e-24 115.5 71 76.1
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.7e-24 115.5 72 77.8
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.2e-24 115.2 72 79.2
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.2e-24 115.2 72 80.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 2.9e-24 114.8 72 73.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.9e-24 114.8 71 74.6
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 2.9e-24 114.8 69 76.8
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 4.9e-24 114.0 72 77.8
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 6.4e-24 113.6 71 73.2
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 6.4e-24 113.6 72 77.8
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 6.4e-24 113.6 73 76.7
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 6.4e-24 113.6 66 78.8
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.1e-23 112.8 71 73.2
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 77.9
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 77.9
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 75.0
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 4.2e-23 110.9 72 75.0
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 5.4e-23 110.5 82 68.3
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 5.4e-23 110.5 74 71.6
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 9.3e-23 109.8 73 78.1
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 3.5e-22 107.8 75 73.3
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 4.6e-22 107.5 67 73.1
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 6.0e-22 107.1 68 76.5
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.7e-21 105.5 71 77.5
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.7e-21 105.5 68 73.5
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 2.3e-21 105.1 85 68.2
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 3.9e-21 104.4 69 71.0
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 5.1e-21 104.0 64 79.7
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 2.5e-20 101.7 70 74.3
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.3e-20 101.3 72 72.2
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.6e-20 100.5 82 63.4
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 5.6e-20 100.5 69 68.1
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 7.3e-20 100.1 61 77.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 2.8e-19 98.2 72 72.2
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 3.6e-19 97.8 101 54.5
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.6e-19 97.8 69 65.2
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.1e-18 96.3 72 62.5
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 5.3e-18 94.0 72 69.4
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.0e-17 92.0 63 68.3
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.6e-17 91.7 52 86.5
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 9.9e-17 89.7 137 42.3
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.3e-16 89.4 70 65.7
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.3e-16 89.4 131 43.5
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 8.4e-16 86.7 70 57.1
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.4e-16 86.7 52 76.9
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.9e-15 85.5 42 100.0
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.3e-13 78.6 50 78.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.5e-12 75.9 68 58.8
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.9e-12 75.5 42 83.3
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 8.1e-11 70.1 60 60.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 8.1e-11 70.1 166 31.9
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.1e-10 69.7 41 80.5
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.8e-10 68.9 39 79.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 5.3e-10 67.4 42 76.2
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 6.9e-10 67.0 42 76.2
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 6.9e-10 67.0 42 78.6
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 2.0e-09 65.5 52 59.6
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.6e-09 65.1 39 76.9
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 7.6e-09 63.5 42 76.2
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 1.7e-08 62.4 35 77.1
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.9e-08 60.8 41 73.2
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.1e-07 59.7 56 51.8
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.4e-07 59.3 36 77.8
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 1.9e-07 58.9 37 78.4
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 4.2e-07 57.8 32 87.5
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 3.5e-06 54.7 40 60.0
MCO13G197 Micromonas commoda HOM05D055842 ORTHO05D008361 4.6e-06 54.3 46 58.7


User provided reference genes

Program Settings