Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 3.8e-45 184.5 96 100.0
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 3.7e-32 141.4 91 73.6
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.6e-30 136.0 91 75.8
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.6e-30 134.4 99 69.7
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 2.3e-29 132.1 88 75.0
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 3.0e-29 131.7 91 72.5
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.1e-28 129.8 91 70.3
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 1.5e-28 129.4 91 67.0
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 3.3e-28 128.3 88 69.3
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 3.3e-28 128.3 91 68.1
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 4.3e-28 127.9 94 67.0
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.3e-28 127.9 89 69.7
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 9.5e-28 126.7 88 71.6
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.2e-27 126.3 94 66.0
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 1.2e-27 126.3 93 66.7
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.2e-27 126.3 89 68.5
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.6e-27 125.9 91 69.2
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 2.8e-27 125.2 88 65.9
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.8e-27 125.2 88 65.9
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 2.8e-27 125.2 78 76.9
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 2.8e-27 125.2 95 66.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 3.6e-27 124.8 91 64.8
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 8.0e-27 123.6 91 67.0
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 8.0e-27 123.6 91 63.7
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 1.1e-26 123.2 90 65.6
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.4e-26 122.9 91 68.1
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.4e-26 122.9 91 68.1
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.8e-26 122.5 88 63.6
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 3.1e-26 121.7 94 68.1
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 4.0e-26 121.3 88 65.9
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 4.0e-26 121.3 80 73.8
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 5.2e-26 120.9 87 69.0
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 6.8e-26 120.6 88 64.8
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 8.9e-26 120.2 91 64.8
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 8.9e-26 120.2 87 69.0
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.2e-25 119.8 86 70.9
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 2.0e-25 119.0 78 74.4
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 3.4e-25 118.2 91 63.7
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 3.4e-25 118.2 87 67.8
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.4e-25 118.2 91 64.8
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 3.4e-25 118.2 91 64.8
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 5.8e-25 117.5 97 59.8
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 5.8e-25 117.5 90 60.0
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 7.5e-25 117.1 78 69.2
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 7.5e-25 117.1 88 65.9
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.7e-24 115.9 91 61.5
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.7e-24 115.9 87 66.7
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.7e-24 115.9 91 63.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 2.2e-24 115.5 89 59.6
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 2.9e-24 115.2 91 61.5
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 2.9e-24 115.2 91 61.5
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 3.7e-24 114.8 93 61.3
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 3.7e-24 114.8 88 62.5
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 4.9e-24 114.4 89 59.6
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 4.9e-24 114.4 91 61.5
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 4.9e-24 114.4 92 65.2
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 6.4e-24 114.0 88 59.1
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 6.4e-24 114.0 78 66.7
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 6.4e-24 114.0 91 62.6
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 8.3e-24 113.6 97 58.8
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.1e-23 113.2 93 61.3
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 2.4e-23 112.1 91 61.5
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 2.4e-23 112.1 88 61.4
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 9.2e-23 110.2 78 62.8
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 9.2e-23 110.2 82 64.6
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.2e-22 109.8 85 60.0
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.2e-22 109.8 93 58.1
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 2.7e-22 108.6 86 64.0
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 3.5e-22 108.2 86 64.0
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 4.6e-22 107.8 91 59.3
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 4.6e-22 107.8 91 57.1
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 6.0e-22 107.5 92 56.5
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.3e-21 106.3 78 66.7
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.3e-21 106.3 72 66.7
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.6e-21 104.0 78 62.8
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 8.6e-21 103.6 92 57.6
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 3.3e-20 101.7 96 56.2
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 4.3e-20 101.3 105 51.4
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.2e-19 99.8 88 59.1
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 2.3e-18 95.5 77 57.1
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 3.1e-18 95.1 69 59.4
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 4.0e-18 94.7 65 66.2
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.5e-17 92.8 55 74.5
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 2.9e-16 88.6 83 56.6
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 2.4e-15 85.5 97 43.3
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.2e-14 83.2 50 82.0
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.7e-13 79.3 49 71.4
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.6e-11 71.6 55 56.4
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.8e-10 69.3 51 60.8
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.2e-09 66.6 69 50.7
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 1.4e-07 59.7 41 61.0
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 3.5e-06 55.1 46 56.5


User provided reference genes

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