Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 4.7e-166 587.8 297 100.0
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 4.7e-102 375.2 217 83.4
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 5.3e-101 371.7 217 83.4
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 4.9e-99 365.2 218 81.2
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 6.4e-99 364.8 223 80.7
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 1.1e-98 364.0 218 81.2
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 1.9e-98 363.2 220 80.0
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 3.2e-98 362.5 217 81.6
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 7.1e-98 361.3 218 81.2
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 9.3e-98 360.9 218 80.3
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.2e-97 360.5 218 80.7
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 2.1e-97 359.8 217 80.6
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 2.7e-97 359.4 217 80.2
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 3.5e-97 359.0 218 79.8
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 4.6e-97 358.6 217 80.6
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 4.6e-97 358.6 218 79.4
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 1.0e-96 357.5 218 79.8
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 2.3e-96 356.3 218 78.9
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 3.0e-96 355.9 216 80.6
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 6.6e-96 354.8 215 80.5
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 1.5e-95 353.6 221 75.1
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 1.9e-95 353.2 217 78.8
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 2.5e-95 352.8 220 79.5
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 2.5e-95 352.8 213 80.8
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 3.3e-95 352.4 216 79.2
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 4.3e-95 352.1 222 77.5
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.6e-95 351.7 217 78.3
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 7.3e-95 351.3 216 79.6
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 7.3e-95 351.3 232 75.9
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 9.6e-95 350.9 217 77.9
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 1.6e-94 350.1 218 78.9
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 2.1e-94 349.7 222 77.5
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 2.1e-94 349.7 223 77.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.1e-94 349.7 217 77.9
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 2.8e-94 349.4 221 76.0
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 2.8e-94 349.4 219 77.6
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 3.6e-94 349.0 217 77.4
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.8e-94 348.6 213 78.4
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 4.8e-94 348.6 217 78.8
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.1e-93 347.4 218 76.6
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.4e-93 347.1 221 75.1
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 9.0e-93 344.4 219 76.3
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.2e-92 344.0 210 79.0
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 1.2e-92 344.0 220 73.6
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 1.5e-92 343.6 220 73.6
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.0e-92 343.2 218 77.5
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 3.4e-92 342.4 216 75.9
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 3.4e-92 342.4 217 76.0
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 4.5e-92 342.0 218 77.1
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 4.5e-92 342.0 218 76.6
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 4.5e-92 342.0 221 74.2
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 9.9e-92 340.9 219 74.9
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 1.3e-91 340.5 220 73.2
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.3e-91 340.5 218 77.5
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 1.3e-91 340.5 220 73.2
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.7e-91 340.1 216 76.9
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.7e-91 340.1 216 76.9
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.7e-91 340.1 220 74.5
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 2.9e-91 339.3 216 76.4
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 2.9e-91 339.3 218 77.5
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 4.9e-91 338.6 217 77.0
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 4.9e-91 338.6 217 74.7
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 4.9e-91 338.6 216 75.0
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 6.4e-91 338.2 218 76.1
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 6.4e-91 338.2 213 75.6
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 6.4e-91 338.2 218 76.6
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 6.4e-91 338.2 216 76.4
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 6.4e-91 338.2 216 76.4
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 6.4e-91 338.2 216 77.3
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 8.4e-91 337.8 232 70.7
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.9e-90 336.7 217 75.6
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 5.4e-90 335.1 218 75.2
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 5.4e-90 335.1 202 81.2
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 9.3e-90 334.3 216 75.5
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 1.2e-89 334.0 216 75.5
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 2.7e-89 332.8 216 75.0
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 6.0e-89 331.6 216 75.0
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 6.0e-89 331.6 216 75.0
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 7.9e-89 331.3 219 74.0
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.8e-88 330.1 221 74.2
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.8e-88 330.1 221 74.2
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 3.0e-88 329.3 216 73.6
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.1e-87 327.4 212 75.5
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 5.6e-87 325.1 219 74.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 7.4e-87 324.7 216 70.8
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 4.5e-84 315.5 221 69.7
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 7.6e-84 314.7 201 78.1
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.1e-82 310.8 196 77.0
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 7.1e-82 308.1 216 70.8
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.2e-81 307.4 216 69.9
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 2.1e-81 306.6 217 72.4
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 2.1e-81 306.6 207 71.0
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 7.9e-81 304.7 243 63.0
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.5e-79 300.4 219 68.0
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 3.1e-77 292.7 216 67.1
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 9.0e-77 291.2 209 71.3
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.0e-75 287.7 205 69.8
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 8.4e-75 284.6 221 67.4
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 1.1e-74 284.3 190 69.5
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 2.7e-73 279.6 222 64.0
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 6.0e-73 278.5 191 73.3
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 7.9e-73 278.1 212 62.7
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.0e-67 261.2 192 65.6
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 8.5e-67 258.1 159 78.0
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.5e-66 256.5 263 55.5
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 3.9e-64 249.2 149 79.9
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 7.7e-60 235.0 148 76.4
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 1.7e-59 233.8 153 74.5
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 7.2e-58 228.4 147 74.8
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 3.9e-56 222.6 177 58.8
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.1e-47 194.5 191 48.2
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.5e-43 178.7 103 80.6
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 9.1e-37 158.3 209 45.5
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 7.7e-28 128.6 97 66.0
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 5.5e-26 122.5 66 86.4
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 1.2e-25 121.3 80 70.0
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 2.6e-23 113.6 98 59.2
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 1.3e-22 111.3 87 60.9
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 2.8e-22 110.2 67 77.6
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 6.8e-16 89.0 66 66.7
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 5.6e-10 69.3 142 31.7
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 5.6e-10 69.3 210 30.0
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.2e-09 68.2 142 31.0
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.6e-09 67.8 142 30.3
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 1.6e-09 67.8 142 30.3
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 1.6e-09 67.8 143 32.9
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 2.8e-09 67.0 153 32.0
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.8e-09 67.0 162 32.7
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.8e-09 67.0 162 32.7
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 4.7e-09 66.2 41 70.7
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 8.0e-09 65.5 142 33.1
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 8.0e-09 65.5 142 30.3
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 1.1e-08 65.1 142 31.7
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 1.8e-08 64.3 161 31.7
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 3.1e-08 63.5 142 31.0
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 4.0e-08 63.2 142 31.7
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 5.2e-08 62.8 142 29.6
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 6.8e-08 62.4 193 26.4
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 6.8e-08 62.4 193 26.4
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 6.8e-08 62.4 193 26.4
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 6.8e-08 62.4 193 26.4
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 8.9e-08 62.0 193 26.4
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 8.9e-08 62.0 142 29.6
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 1.5e-07 61.2 198 28.3
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 3.4e-07 60.1 151 28.5
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 3.4e-07 60.1 38 68.4
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 3.4e-07 60.1 142 31.0
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 1.3e-06 58.2 165 26.1


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