Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 6.4e-64 247.3 128 100.0
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.6e-62 241.1 128 96.9
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 2.8e-43 178.7 123 71.5
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.4e-42 176.4 126 73.0
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 3.1e-42 175.3 118 71.2
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 4.1e-42 174.9 126 73.0
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 6.9e-42 174.1 123 74.0
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 6.9e-42 174.1 117 73.5
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 9.0e-42 173.7 120 73.3
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 1.2e-41 173.3 126 69.0
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 1.2e-41 173.3 122 71.3
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.5e-41 172.9 122 70.5
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 2.6e-41 172.2 128 70.3
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 4.5e-41 171.4 122 69.7
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 2.2e-40 169.1 128 69.5
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 2.2e-40 169.1 123 71.5
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 2.9e-40 168.7 127 67.7
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 5.0e-40 167.9 128 67.2
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 6.5e-40 167.5 120 70.8
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 8.5e-40 167.2 118 72.0
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.1e-39 166.8 123 72.4
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.4e-39 166.4 116 71.6
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.9e-39 166.0 114 69.3
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.5e-39 165.6 123 71.5
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.5e-39 165.6 123 71.5
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 3.2e-39 165.2 128 66.4
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 4.2e-39 164.9 121 64.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 4.2e-39 164.9 116 67.2
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 5.5e-39 164.5 120 70.0
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-38 163.3 123 71.5
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-38 163.3 123 71.5
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.6e-38 162.9 116 70.7
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.1e-38 162.5 120 65.0
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 2.7e-38 162.2 121 65.3
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 3.6e-38 161.8 121 67.8
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 3.6e-38 161.8 121 64.5
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 4.6e-38 161.4 116 69.8
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 6.1e-38 161.0 92 87.0
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 7.9e-38 160.6 123 69.1
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 7.9e-38 160.6 128 64.8
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.4e-37 159.8 125 61.6
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 1.8e-37 159.5 121 66.9
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.3e-37 159.1 133 67.7
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.9e-37 158.3 92 85.9
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.9e-37 158.3 92 85.9
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 5.1e-37 157.9 121 68.6
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.5e-36 156.4 121 64.5
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 1.5e-36 156.4 123 61.8
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 2.5e-36 155.6 158 55.7
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 3.3e-36 155.2 121 68.6
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 4.3e-36 154.8 116 67.2
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 7.4e-36 154.1 113 69.0
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 9.7e-36 153.7 121 64.5
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.3e-35 153.3 113 68.1
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 1.3e-35 153.3 120 62.5
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 2.2e-35 152.5 110 64.5
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.1e-34 150.2 117 62.4
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.1e-34 150.2 110 64.5
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 1.8e-34 149.4 119 58.8
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 1.8e-34 149.4 123 65.9
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 2.4e-34 149.1 110 62.7
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 2.4e-34 149.1 114 60.5
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 2.4e-34 149.1 114 60.5
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 2.4e-34 149.1 114 60.5
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 2.4e-34 149.1 114 60.5
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 2.4e-34 149.1 121 63.6
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 5.3e-34 147.9 114 65.8
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 5.3e-34 147.9 119 59.7
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 9.1e-34 147.1 116 62.1
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 1.2e-33 146.7 120 60.8
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.5e-33 146.4 121 61.2
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.5e-33 146.4 118 62.7
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 2.6e-33 145.6 121 61.2
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 4.5e-33 144.8 122 59.8
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 4.5e-33 144.8 114 65.8
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 7.7e-33 144.1 117 57.3
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 1.0e-32 143.7 92 76.1
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.0e-32 143.7 84 79.8
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.3e-32 143.3 125 59.2
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 1.7e-32 142.9 110 60.9
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.2e-32 142.5 156 54.5
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 2.2e-32 142.5 114 58.8
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 8.5e-32 140.6 116 61.2
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 8.5e-32 140.6 116 61.2
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 1.1e-31 140.2 114 59.6
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 1.1e-31 140.2 119 58.0
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.9e-31 139.4 131 58.0
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 2.5e-31 139.0 120 58.3
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 4.2e-31 138.3 111 60.4
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.6e-30 136.3 116 59.5
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 2.7e-30 135.6 111 59.5
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 2.7e-30 135.6 93 73.1
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.6e-30 135.2 107 57.9
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 4.7e-30 134.8 94 70.2
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.4e-29 133.3 101 67.3
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 8.8e-29 130.6 118 53.4
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 2.6e-28 129.0 91 65.9
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 3.3e-28 128.6 200 41.5
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 1.7e-27 126.3 88 68.2
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 4.8e-27 124.8 114 59.6
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.6e-25 119.0 92 64.1
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 3.8e-24 115.2 120 49.2
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 3.6e-22 108.6 110 46.4
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 8.0e-22 107.5 88 63.6
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 3.3e-20 102.1 77 62.3
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 6.3e-19 97.8 85 56.5
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 1.6e-17 93.2 110 50.0
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 1.2e-09 67.0 80 43.8


User provided reference genes

Program Settings