Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.8e-52 206.8 104 100.0
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.8e-52 206.8 104 100.0
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.8e-48 195.7 104 95.2
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.2e-37 158.3 92 85.9
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.9e-36 153.7 92 83.7
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 4.9e-30 134.4 84 76.2
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 4.9e-30 134.4 92 70.7
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 8.4e-30 133.7 90 71.1
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 8.4e-30 133.7 84 75.0
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 8.4e-30 133.7 92 71.7
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.4e-29 132.9 93 73.1
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.9e-29 132.5 91 69.2
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.5e-29 132.1 92 70.7
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 3.2e-29 131.7 90 70.0
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 3.2e-29 131.7 90 70.0
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 5.5e-29 131.0 87 70.1
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 9.3e-29 130.2 81 74.1
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.2e-28 129.8 92 67.4
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.6e-28 129.4 87 71.3
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 2.1e-28 129.0 92 69.6
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 2.7e-28 128.6 84 71.4
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 2.7e-28 128.6 87 73.6
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 6.0e-28 127.5 92 67.4
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.0e-27 126.7 92 65.2
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.0e-27 126.7 84 72.6
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.8e-27 125.9 92 66.3
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.8e-27 125.9 84 70.2
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 2.3e-27 125.6 84 72.6
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 3.0e-27 125.2 84 71.4
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 3.9e-27 124.8 84 73.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.1e-27 124.4 87 70.1
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 6.7e-27 124.0 84 71.4
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 8.7e-27 123.6 92 62.0
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.5e-26 122.9 87 67.8
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.5e-26 122.9 92 65.2
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.9e-26 122.5 83 71.1
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.9e-26 122.5 87 67.8
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.9e-26 122.5 87 67.8
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 2.5e-26 122.1 90 65.6
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 7.4e-26 120.6 92 65.2
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 7.4e-26 120.6 87 63.2
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 1.3e-25 119.8 92 63.0
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.6e-25 119.4 87 66.7
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.6e-25 119.4 87 66.7
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.1e-25 119.0 91 60.4
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 2.1e-25 119.0 92 62.0
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.8e-25 118.6 85 68.2
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 8.2e-25 117.1 92 59.8
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 8.2e-25 117.1 87 64.4
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.1e-24 116.7 90 61.1
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.4e-24 116.3 92 58.7
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 1.8e-24 115.9 85 64.7
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.8e-24 115.9 84 66.7
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 2.4e-24 115.5 85 67.1
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 2.4e-24 115.5 92 60.9
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 2.4e-24 115.5 84 66.7
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 2.4e-24 115.5 88 64.8
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 9.0e-24 113.6 85 65.9
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 9.0e-24 113.6 108 59.3
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 9.0e-24 113.6 92 58.7
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.2e-23 113.2 85 62.4
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.0e-23 112.5 87 59.8
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 3.4e-23 111.7 85 64.7
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 3.4e-23 111.7 107 57.9
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 3.4e-23 111.7 85 63.5
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 4.5e-23 111.3 85 61.2
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.0e-22 110.2 84 64.3
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 1.0e-22 110.2 80 62.5
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 1.0e-22 110.2 85 64.7
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.3e-22 109.8 86 59.3
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.7e-22 109.4 84 63.1
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 1.7e-22 109.4 92 55.4
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 2.9e-22 108.6 85 61.2
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 2.9e-22 108.6 83 63.9
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.8e-22 108.2 86 58.1
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 5.0e-22 107.8 86 61.6
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 5.0e-22 107.8 91 56.0
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 8.4e-22 107.1 85 62.4
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 8.4e-22 107.1 83 61.4
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 8.4e-22 107.1 80 60.0
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 8.4e-22 107.1 80 60.0
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 8.4e-22 107.1 80 60.0
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 8.4e-22 107.1 80 60.0
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.1e-21 106.7 87 59.8
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.1e-21 106.7 92 59.8
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 2.5e-21 105.5 90 55.6
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 3.2e-21 105.1 81 59.3
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 5.5e-21 104.4 83 62.7
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 7.2e-21 104.0 85 60.0
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 7.2e-21 104.0 85 60.0
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 9.3e-21 103.6 84 60.7
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 9.3e-21 103.6 83 60.2
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 4.6e-20 101.3 80 60.0
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 6.1e-20 100.9 85 54.1
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.8e-19 99.4 79 62.0
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.3e-19 99.0 80 58.8
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 6.7e-19 97.4 80 56.2
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.1e-18 96.7 84 57.1
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.5e-18 96.3 83 55.4
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 9.7e-18 93.6 84 54.8
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.3e-17 93.2 92 47.8
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 2.0e-15 85.9 85 50.6
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 7.2e-13 77.4 83 41.0
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.0e-11 73.6 52 69.2
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 3.3e-10 68.6 81 48.1
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.7e-09 66.2 48 60.4
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.5e-07 59.7 52 53.8


User provided reference genes

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