Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.0e-51 206.5 104 100.0
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-48 196.4 104 95.2
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-48 196.4 104 95.2
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.9e-38 161.8 92 87.0
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.1e-37 157.1 92 84.8
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.7e-30 136.0 92 70.7
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.2e-30 135.6 90 71.1
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 2.2e-30 135.6 84 76.2
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 2.9e-30 135.2 92 71.7
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 3.8e-30 134.8 84 75.0
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 4.9e-30 134.4 93 73.1
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 6.5e-30 134.0 92 70.7
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 8.4e-30 133.7 91 69.2
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 2.5e-29 132.1 87 70.1
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 3.2e-29 131.7 81 74.1
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 3.2e-29 131.7 92 67.4
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 4.2e-29 131.3 84 72.6
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 5.5e-29 131.0 90 68.9
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 5.5e-29 131.0 90 68.9
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 7.1e-29 130.6 87 71.3
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 9.3e-29 130.2 87 73.6
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 1.6e-28 129.4 92 68.5
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 2.1e-28 129.0 92 67.4
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 2.7e-28 128.6 92 65.2
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 4.6e-28 127.9 84 72.6
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 7.9e-28 127.1 92 66.3
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 7.9e-28 127.1 84 70.2
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 1.0e-27 126.7 84 72.6
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 1.3e-27 126.3 84 71.4
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.8e-27 125.9 87 70.1
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 1.8e-27 125.9 84 73.8
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 3.0e-27 125.2 84 71.4
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 5.1e-27 124.4 87 67.8
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 6.7e-27 124.0 83 71.1
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 6.7e-27 124.0 87 67.8
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 6.7e-27 124.0 87 67.8
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 6.7e-27 124.0 92 65.2
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 8.7e-27 123.6 92 60.9
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 8.7e-27 123.6 90 65.6
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 1.9e-26 122.5 92 64.1
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.5e-26 122.1 92 65.2
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 2.5e-26 122.1 87 63.2
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 3.3e-26 121.7 92 63.0
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 5.7e-26 120.9 85 69.4
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.7e-26 120.9 87 66.7
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.7e-26 120.9 87 66.7
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.3e-25 119.8 85 69.4
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.6e-25 119.4 92 62.0
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 1.6e-25 119.4 92 59.8
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 2.1e-25 119.0 85 65.9
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.1e-25 119.0 91 59.3
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 2.8e-25 118.6 90 62.2
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 2.8e-25 118.6 87 64.4
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 6.2e-25 117.5 88 65.9
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 8.2e-25 117.1 92 59.8
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.1e-24 116.7 92 57.6
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 1.4e-24 116.3 85 67.1
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.8e-24 115.9 84 65.5
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 2.4e-24 115.5 85 63.5
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 2.4e-24 115.5 84 65.5
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.4e-24 115.5 87 60.9
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 3.1e-24 115.2 108 59.3
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 5.3e-24 114.4 85 65.9
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 5.3e-24 114.4 85 64.7
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 9.0e-24 113.6 107 57.9
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.5e-23 112.8 84 64.3
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 2.6e-23 112.1 84 63.1
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.4e-23 111.7 80 62.5
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.4e-23 111.7 86 60.5
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 4.5e-23 111.3 83 65.1
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 5.8e-23 110.9 85 62.4
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 5.8e-23 110.9 85 60.0
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 5.8e-23 110.9 85 64.7
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 1.0e-22 110.2 80 61.2
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.0e-22 110.2 80 61.2
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.0e-22 110.2 80 61.2
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 1.0e-22 110.2 80 61.2
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.0e-22 110.2 86 59.3
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 1.3e-22 109.8 86 62.8
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.3e-22 109.8 92 60.9
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 1.7e-22 109.4 85 63.5
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 1.7e-22 109.4 92 54.3
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 2.2e-22 109.0 83 61.4
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 2.9e-22 108.6 87 59.8
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 3.8e-22 108.2 90 56.7
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 5.0e-22 107.8 91 54.9
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.1e-21 106.7 81 59.3
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.1e-21 106.7 83 63.9
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.4e-21 106.3 83 61.4
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 1.4e-21 106.3 85 61.2
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 1.4e-21 106.3 85 61.2
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 2.5e-21 105.5 84 60.7
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 7.2e-21 104.0 80 63.8
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.6e-20 102.8 80 60.0
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.7e-20 102.1 80 60.0
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 4.6e-20 101.3 85 54.1
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 1.3e-19 99.8 80 56.2
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.3e-19 99.8 74 62.2
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 3.0e-19 98.6 84 57.1
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.1e-18 96.7 78 59.0
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 4.3e-18 94.7 92 47.8
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 1.8e-16 89.4 85 51.8
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 5.0e-14 81.3 83 42.2
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 7.2e-13 77.4 52 71.2
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 6.1e-12 74.3 81 49.4
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 2.2e-09 65.9 48 58.3
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 2.2e-09 65.9 52 57.7


User provided reference genes

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