Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02949 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-38 162.5 73 100.0
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.8e-34 146.4 72 90.3
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.8e-34 146.4 72 90.3
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.8e-34 146.4 72 90.3
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.5e-33 143.3 72 88.9
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.8e-32 140.6 72 87.5
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-31 139.4 72 87.5
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-31 137.5 70 90.0
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-31 137.1 72 84.7
Eucgr.A00957 Eucalyptus grandis HOM05D007774 ORTHO05D000309 6.5e-29 130.2 72 81.9
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-26 122.1 72 76.4
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-26 122.1 72 76.4
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-26 122.1 72 76.4
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-26 122.1 72 76.4
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.3e-26 121.7 72 76.4
Eucgr.D01113 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.2e-26 120.6 72 69.4
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.8e-26 119.8 71 76.1
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-25 119.4 72 73.6
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.5e-25 119.0 72 75.0
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.6e-25 118.2 72 69.4
Eucgr.H02800 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-25 117.9 68 69.1
Eucgr.L01275 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-25 117.9 72 69.4
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.4e-25 117.5 72 65.3
Eucgr.B01204 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.5e-25 116.7 68 77.9
Eucgr.B01060 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-24 115.9 72 73.6
Eucgr.C01025 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-24 115.9 72 75.0
Eucgr.B01616 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.4e-23 111.7 71 67.6
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.4e-23 111.7 72 62.5
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.7e-22 108.2 57 77.2
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.7e-22 106.7 72 69.4
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.6e-21 103.2 72 66.7
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.8e-19 98.2 65 69.2
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 5.6e-12 73.9 56 55.4
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-11 70.9 58 51.7
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-11 70.9 58 51.7
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-10 68.9 58 50.0
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 6.8e-10 67.0 58 50.0
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 8.9e-10 66.6 56 51.8
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 1.2e-09 66.2 63 44.4
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-09 65.9 63 44.4
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-09 65.9 56 48.2
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 2.6e-09 65.1 56 48.2
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 4.4e-09 64.3 68 44.1
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 7.5e-09 63.5 51 51.0
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 7.5e-09 63.5 56 46.4
Eucgr.H03328 Eucalyptus grandis HOM05D015495 ORTHO05D000309 7.5e-09 63.5 68 44.1
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.3e-08 62.8 44 59.1
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 1.3e-08 62.8 58 46.6
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-08 61.2 58 44.8
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 3.7e-08 61.2 58 44.8
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 3.7e-08 61.2 58 43.1
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 3.7e-08 61.2 54 46.3
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 3.7e-08 61.2 54 46.3
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 4.9e-08 60.8 62 50.0
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 4.9e-08 60.8 55 45.5
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 4.9e-08 60.8 54 46.3
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 6.4e-08 60.5 44 56.8
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 6.4e-08 60.5 65 47.7
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 6.4e-08 60.5 41 58.5
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 6.4e-08 60.5 64 39.1
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 6.4e-08 60.5 64 39.1
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.1e-07 59.7 56 42.9
Eucgr.J01243 Eucalyptus grandis HOM05D015495 ORTHO05D000309 1.4e-07 59.3 63 42.9
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-07 59.3 41 56.1
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-07 59.3 60 46.7
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-07 59.3 60 46.7
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 58.9 58 48.3
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 58.5 57 43.9
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 58.5 57 43.9
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 58.5 58 48.3
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 58.5 60 41.7
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 58.5 60 41.7
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 58.5 57 43.9
CANSAT78G2422 Cannabis sativa HOM05D063059 ORTHO05D000309 2.4e-07 58.5 66 43.9
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 2.4e-07 58.5 59 40.7
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-07 58.5 54 50.0
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 3.2e-07 58.2 41 51.2
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-07 58.2 47 48.9
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 3.2e-07 58.2 57 43.9
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-07 58.2 41 56.1
Psat0s2572g0080 Pisum sativum HOM05D018012 ORTHO05D000309 3.2e-07 58.2 66 42.4
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 3.2e-07 58.2 70 41.4
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 3.2e-07 58.2 64 43.8
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 4.1e-07 57.8 50 46.0
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 4.1e-07 57.8 49 49.0
Eucgr.C01594 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-07 57.8 63 41.3
Eucgr.L00906 Eucalyptus grandis HOM05D015495 ORTHO05D000309 4.1e-07 57.8 65 43.1
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-07 57.8 41 56.1
Nitab4.5_0001041g0150 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.1e-07 57.8 57 43.9
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 5.4e-07 57.4 41 53.7
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 5.4e-07 57.4 53 39.6
Nitab4.5_0006105g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.4e-07 57.4 56 44.6
SalBow6G0195 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.4e-07 57.4 64 46.9
SalBow7G1419 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.4e-07 57.4 64 46.9
SalBow7G2169 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.4e-07 57.4 64 46.9
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 7.0e-07 57.0 54 42.6
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 57.0 55 43.6
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 57.0 55 43.6
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 57.0 55 43.6
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-07 57.0 55 43.6
Nitab4.5_0001276g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.0e-07 57.0 73 42.5
QL06p049616 Quercus lobata HOM05D001383 ORTHO05D000309 7.0e-07 57.0 58 46.6
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 9.2e-07 56.6 46 47.8
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 9.2e-07 56.6 56 42.9
Cfa010532 Carpinus fangiana HOM05D016218 ORTHO05D000309 9.2e-07 56.6 49 46.9
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.2e-07 56.6 47 46.8
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 9.2e-07 56.6 41 53.7
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 9.2e-07 56.6 41 53.7
Medtr1g039350 Medicago truncatula HOM05D001383 ORTHO05D000309 9.2e-07 56.6 65 38.5
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.2e-07 56.6 48 50.0
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.2e-07 56.6 48 50.0
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.2e-07 56.6 48 50.0
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 9.2e-07 56.6 44 50.0
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.2e-06 56.2 49 44.9
COL.COLO4_13767 Corchorus olitorius HOM05D002127 ORTHO05D002274 1.2e-06 56.2 70 41.4
Hma1.2p1_1098F.1_g256770 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 56.2 65 44.6
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.2e-06 56.2 46 50.0
Nitab4.5_0000147g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-06 56.2 73 42.5
Nitab4.5_0000800g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-06 56.2 52 50.0
Nitab4.5_0009942g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-06 56.2 73 41.1
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-06 55.8 58 48.3
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 1.6e-06 55.8 46 43.5
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-06 55.8 55 43.6
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.6e-06 55.8 49 44.9
DCAR_017399 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-06 55.8 51 45.1
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 1.6e-06 55.8 41 53.7
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 55.8 41 53.7
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 55.8 41 53.7
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-06 55.5 57 42.1
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-06 55.5 56 42.9
Eucgr.L01870 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-06 55.5 66 42.4
Solyc03g083735.1 Solanum lycopersicum HOM05D008126 ORTHO05D000309 2.0e-06 55.5 50 46.0
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-06 55.1 55 43.6
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-06 55.1 51 43.1
Cfa008132 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.7e-06 55.1 43 46.5
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.7e-06 55.1 43 48.8
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-06 55.1 41 51.2
Lsat_1_v5_gn_6_181 Lactuca sativa HOM05D028082 ORTHO05D000309 2.7e-06 55.1 65 41.5
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.1 41 53.7
Aqoxy1G03189 Aquilegia oxysepala HOM05D052364 ORTHO05D038503 3.5e-06 54.7 42 52.4
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-06 54.7 51 43.1
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 3.5e-06 54.7 54 46.3
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 3.5e-06 54.7 54 46.3
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-06 54.7 66 36.4
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-06 54.7 40 55.0
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-06 54.7 59 45.8
Nitab4.5_0000101g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.5e-06 54.7 52 48.1
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.5e-06 54.7 48 47.9
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.5e-06 54.7 48 47.9
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 4.6e-06 54.3 60 45.0
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-06 54.3 40 50.0
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 4.6e-06 54.3 41 51.2
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.6e-06 54.3 41 48.8
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 4.6e-06 54.3 53 49.1
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-06 54.3 45 48.9
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 4.6e-06 54.3 79 38.0
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 6.0e-06 53.9 55 43.6
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 6.0e-06 53.9 49 42.9
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 6.0e-06 53.9 69 39.1
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 6.0e-06 53.9 65 41.5
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-06 53.9 45 48.9
Nitab4.5_0000129g0270 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.0e-06 53.9 73 39.7
Ah.03g141040 Amaranthus hybridus HOM05D001173 ORTHO05D001047 7.8e-06 53.5 44 52.3
EL10Ac9g21248 Beta vulgaris HOM05D026991 ORTHO05D023807 7.8e-06 53.5 55 43.6
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 7.8e-06 53.5 51 41.2
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 7.8e-06 53.5 70 45.7
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 7.8e-06 53.5 41 51.2
Nitab4.5_0006239g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.8e-06 53.5 73 39.7
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 7.8e-06 53.5 58 43.1


User provided reference genes

Program Settings