Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02910 Eucalyptus grandis HOM05D043694 ORTHO05D002739 9.7e-95 350.1 177 100.0
Eucgr.H02908 Eucalyptus grandis HOM05D043694 ORTHO05D002739 9.3e-29 131.0 290 35.2
Eucgr.H02912 Eucalyptus grandis HOM05D020229 ORTHO05D002739 1.1e-24 117.5 160 43.1
Eucgr.H02911 Eucalyptus grandis HOM05D020229 ORTHO05D002739 1.0e-14 84.3 156 35.3
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.7e-09 65.9 86 36.0
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 4.8e-09 65.5 84 36.9
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 4.8e-09 65.5 84 38.1
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.3e-09 65.1 83 37.3
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 8.2e-09 64.7 96 32.3
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.8e-08 63.5 84 35.7
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.8e-08 63.5 84 35.7
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 3.1e-08 62.8 84 32.1
Sabra19G0038300 Salix brachista HOM05D002652 ORTHO05D002739 9.0e-08 61.2 83 36.1
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.2e-07 60.8 84 35.7
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 1.5e-07 60.5 86 36.0
Sabra19G0038700 Salix brachista HOM05D002652 ORTHO05D002739 1.5e-07 60.5 83 36.1
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 2.0e-07 60.1 83 37.3
Potri.019G026820 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.0e-07 60.1 84 34.5
Sabra19G0035700 Salix brachista HOM05D002652 ORTHO05D002739 2.0e-07 60.1 84 36.9
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 2.6e-07 59.7 85 34.1
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 2.6e-07 59.7 87 33.3
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 2.6e-07 59.7 88 31.8
Sabra19G0038800 Salix brachista HOM05D002652 ORTHO05D002739 2.6e-07 59.7 83 34.9
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 3.4e-07 59.3 86 36.0
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 3.4e-07 59.3 86 34.9
Potri.019G026900 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.5e-07 58.9 84 38.1
Potri.019G027100 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.5e-07 58.9 84 38.1
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 5.9e-07 58.5 84 34.5
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.9e-07 58.5 84 32.1
Sabra19G0038500 Salix brachista HOM05D002652 ORTHO05D002739 5.9e-07 58.5 83 33.7
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 7.7e-07 58.2 84 33.3
Potri.019G028800 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.0e-06 57.8 84 38.1
Sabra19G0039000 Salix brachista HOM05D002652 ORTHO05D002739 1.0e-06 57.8 84 34.5
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.0e-06 57.8 89 33.7
Aa31LG7G1790 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.3e-06 57.4 84 34.5
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 1.3e-06 57.4 88 35.2
DCAR_002581 Daucus carota HOM05D002652 ORTHO05D002739 1.3e-06 57.4 91 30.8
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.7e-06 57.0 89 34.8
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.7e-06 57.0 84 32.1
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.7e-06 57.0 84 31.0
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.7e-06 57.0 76 36.8
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.7e-06 57.0 76 36.8
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.2e-06 56.6 88 36.4
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.2e-06 56.6 85 32.9
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.2e-06 56.6 82 40.2
Duzib151G0943 Durio zibethinus HOM05D002652 ORTHO05D002739 2.9e-06 56.2 84 31.0
Sabra19G0038400 Salix brachista HOM05D002652 ORTHO05D002739 2.9e-06 56.2 84 33.3
Aa31LG9G4330 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.8e-06 55.8 84 33.3
COL.COLO4_15908 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.8e-06 55.8 78 34.6
Sabra19G0038900 Salix brachista HOM05D002652 ORTHO05D002739 5.0e-06 55.5 86 31.4
Potri.019G029100 Populus trichocarpa HOM05D002652 ORTHO05D002739 6.5e-06 55.1 84 33.3
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 8.5e-06 54.7 84 32.1
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 8.5e-06 54.7 86 32.6


User provided reference genes

Program Settings