Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.8e-148 529.3 274 100.0
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.2e-105 385.2 268 75.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.6e-104 382.1 271 73.4
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.3e-103 379.4 269 73.6
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 3.0e-103 379.0 263 75.7
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 4.0e-103 378.6 269 74.0
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 8.8e-103 377.5 268 72.8
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.2e-102 377.1 267 72.7
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 4.4e-102 375.2 271 72.7
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 3.7e-101 372.1 266 74.4
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 6.3e-101 371.3 266 72.9
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 8.3e-101 370.9 270 71.1
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.8e-100 369.8 269 71.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.8e-100 369.8 268 70.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.8e-100 369.8 269 71.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 3.1e-100 369.0 266 73.3
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 3.1e-100 369.0 268 72.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 7.0e-100 367.9 266 72.9
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 9.1e-100 367.5 264 73.1
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.2e-99 367.1 265 72.5
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.2e-99 367.1 274 70.8
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.0e-98 364.0 274 70.8
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.9e-98 362.5 273 68.9
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 3.8e-98 362.1 272 70.6
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.8e-98 362.1 274 70.4
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 8.6e-98 360.9 272 71.0
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.1e-97 360.5 266 70.3
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.1e-97 360.5 274 69.3
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.5e-97 360.1 267 71.2
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.9e-97 359.8 268 71.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.2e-97 359.0 267 70.0
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 7.2e-97 357.8 267 69.7
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 3.6e-96 355.5 267 69.3
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.7e-96 355.1 268 69.8
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.4e-95 353.6 268 69.4
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.3e-95 352.8 274 67.2
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 3.4e-94 349.0 268 68.3
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.4e-94 349.0 271 69.0
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 5.7e-94 348.2 267 67.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 5.7e-94 348.2 271 68.6
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.3e-93 347.1 321 60.1
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.7e-93 346.7 269 67.3
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 2.2e-93 346.3 227 79.7
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.7e-93 345.5 266 66.9
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 3.7e-93 345.5 269 65.1
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.4e-92 343.6 265 66.0
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.8e-92 343.2 269 66.5
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 4.1e-92 342.0 263 67.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 5.4e-92 341.7 269 65.8
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 5.4e-92 341.7 264 65.5
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 9.2e-92 340.9 227 78.9
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.7e-91 339.3 267 66.3
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 3.5e-91 339.0 265 65.3
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 4.5e-91 338.6 268 63.8
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 5.9e-91 338.2 268 66.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 7.8e-91 337.8 265 65.7
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.0e-90 337.4 241 72.6
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 1.3e-90 337.0 268 66.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 2.3e-90 336.3 275 65.1
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.9e-90 335.9 268 66.4
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.8e-90 335.5 267 64.8
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 8.6e-90 334.3 265 64.5
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.5e-89 333.6 268 65.7
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.5e-89 333.6 268 65.7
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.5e-89 332.8 265 64.5
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 3.3e-89 332.4 265 64.5
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 5.6e-89 331.6 262 66.4
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.1e-88 329.7 272 64.0
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 6.1e-88 328.2 278 63.3
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 8.0e-88 327.8 277 63.9
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.4e-87 327.0 269 65.4
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 6.8e-87 324.7 267 64.0
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.2e-86 323.9 223 75.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.0e-86 323.2 272 64.0
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 2.6e-86 322.8 273 63.4
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.4e-86 322.0 270 63.0
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 7.5e-86 321.2 268 62.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.3e-85 320.5 275 64.7
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.7e-85 320.1 273 63.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.7e-85 320.1 268 63.8
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.7e-85 318.9 275 62.2
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 2.4e-84 316.2 270 63.3
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 3.2e-84 315.8 267 64.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 7.0e-84 314.7 264 64.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.2e-83 313.9 269 61.3
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.5e-81 306.2 270 60.4
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 3.3e-81 305.8 272 58.8
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 5.6e-81 305.1 225 70.2
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 5.6e-81 305.1 270 60.0
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 6.2e-80 301.6 231 68.8
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.4e-79 300.4 288 58.0
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.2e-78 297.4 231 67.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 4.4e-78 295.4 267 57.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.9e-77 292.7 268 60.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.9e-77 292.0 268 60.1
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.6e-75 287.0 267 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 2.7e-75 286.2 259 56.0
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.7e-74 283.5 232 62.9
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 5.0e-74 282.0 263 58.9
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.7e-72 275.4 266 57.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 7.5e-70 268.1 391 43.5
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.0e-66 256.1 276 53.3
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.7e-59 233.0 233 54.9
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 4.3e-57 225.7 260 49.2
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 9.9e-54 214.5 139 79.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 8.1e-48 194.9 186 60.8
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.5e-46 190.7 179 62.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.8e-46 188.7 142 64.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 2.2e-45 186.8 210 52.4
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.6e-43 180.6 217 49.3
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 4.0e-39 166.0 136 69.1
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.0e-39 166.0 121 74.4
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 3.8e-37 159.5 137 56.9
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 2.1e-35 153.7 137 55.5
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.6e-30 136.7 136 61.0
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 7.6e-30 135.2 115 62.6
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 7.9e-27 125.2 131 58.8
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 5.9e-22 109.0 204 39.7
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 7.6e-22 108.6 81 69.1
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 7.2e-20 102.1 248 31.9
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.9e-19 98.6 80 66.2
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 2.2e-13 80.5 108 45.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 3.3e-09 66.6 47 63.8


User provided reference genes

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