Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 1.4e-252 875.9 468 100.0
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 8.1e-173 610.9 479 69.9
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 1.5e-158 563.5 470 66.0
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 2.8e-157 559.3 477 66.2
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 6.2e-157 558.1 369 77.2
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 1.1e-156 557.4 471 66.2
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.0e-156 555.4 470 66.2
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.0e-156 555.4 474 65.0
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 7.6e-155 551.2 368 76.4
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 8.4e-154 547.7 465 64.9
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 1.4e-153 547.0 369 75.1
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 1.2e-152 543.9 468 64.3
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 4.6e-152 542.0 365 74.0
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 1.0e-151 540.8 481 63.4
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.3e-151 540.4 470 61.9
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 1.1e-150 537.3 472 62.9
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 1.9e-150 536.6 468 63.0
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 3.3e-150 535.8 358 74.6
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 3.3e-150 535.8 476 64.1
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 7.4e-150 534.6 472 64.2
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 7.4e-150 534.6 468 64.3
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 9.6e-150 534.3 473 62.8
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 1.3e-149 533.9 363 73.8
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 2.8e-149 532.7 463 63.9
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 3.7e-149 532.3 371 73.0
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 8.2e-149 531.2 362 73.2
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.4e-148 530.4 473 62.6
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 1.4e-148 530.4 360 75.0
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 1.8e-148 530.0 476 62.8
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 1.8e-148 530.0 367 73.8
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 2.4e-148 529.6 473 62.8
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 2.4e-148 529.6 356 76.7
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 3.1e-148 529.3 472 62.9
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 3.1e-148 529.3 468 63.9
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 4.0e-148 528.9 476 63.7
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 4.0e-148 528.9 471 61.6
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 2.6e-147 526.2 467 63.2
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 4.5e-147 525.4 372 72.6
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 7.6e-147 524.6 371 73.3
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.0e-146 524.2 481 62.4
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.0e-146 524.2 469 62.9
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 3.8e-146 522.3 481 62.2
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 3.8e-146 522.3 364 72.8
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 8.4e-146 521.2 469 62.5
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.4e-145 520.4 468 62.6
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 3.2e-145 519.2 372 71.2
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 9.3e-145 517.7 367 70.8
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 1.6e-144 516.9 422 66.4
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 2.7e-144 516.2 364 73.1
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 7.9e-144 514.6 471 61.8
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 7.9e-144 514.6 362 72.1
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 1.0e-143 514.2 358 73.7
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 1.0e-143 514.2 495 59.2
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 1.3e-143 513.8 398 68.3
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 1.3e-143 513.8 502 60.4
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 3.9e-143 512.3 467 62.3
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 8.7e-143 511.1 363 71.9
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 3.3e-142 509.2 419 65.6
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 7.4e-142 508.1 466 59.7
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 9.7e-142 507.7 359 70.2
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 1.3e-141 507.3 466 60.9
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 3.7e-141 505.8 361 68.7
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 3.7e-141 505.8 362 70.7
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 6.3e-141 505.0 468 60.3
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 1.4e-140 503.8 466 59.9
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 1.8e-140 503.4 363 72.2
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 2.4e-140 503.1 470 59.4
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 2.4e-140 503.1 362 70.4
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 2.4e-140 503.1 363 70.5
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 2.4e-140 503.1 467 60.4
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 5.3e-140 501.9 368 69.3
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 6.9e-140 501.5 472 60.2
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 2.6e-139 499.6 464 58.2
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 7.7e-139 498.0 455 60.4
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 7.7e-139 498.0 468 59.6
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 7.7e-139 498.0 415 64.8
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 1.7e-138 496.9 469 60.6
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 2.2e-138 496.5 467 59.5
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 2.2e-138 496.5 471 60.1
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 2.2e-138 496.5 410 64.1
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.6e-136 490.3 360 69.2
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 2.1e-136 490.0 366 68.9
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 1.4e-135 487.3 446 60.8
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 1.8e-135 486.9 357 68.3
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 6.7e-135 485.0 545 54.1
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 8.8e-135 484.6 362 68.0
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 2.5e-134 483.0 375 66.1
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 1.3e-133 480.7 364 67.3
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 2.8e-133 479.6 358 67.3
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 4.8e-133 478.8 350 70.9
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 4.8e-133 478.8 350 70.9
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 1.1e-132 477.6 398 63.1
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 2.4e-132 476.5 337 71.5
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 1.4e-129 467.2 338 71.6
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 5.5e-129 465.3 359 66.0
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 9.4e-129 464.5 367 66.2
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 1.2e-128 464.2 335 71.6
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 1.8e-127 460.3 353 67.1
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 1.3e-125 454.1 343 68.8
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 2.9e-122 443.0 466 54.3
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 6.5e-122 441.8 463 56.4
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 4.2e-121 439.1 478 55.9
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 5.2e-119 432.2 310 71.6
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 1.0e-114 417.9 333 64.6
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 3.7e-109 399.4 302 65.2
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 1.6e-107 394.0 231 81.0
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 5.5e-105 385.6 346 55.5
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 3.6e-104 382.9 355 60.0
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 3.0e-103 379.8 356 55.1
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 3.0e-103 379.8 347 60.8
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 5.5e-97 359.0 360 53.3
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 9.8e-94 348.2 246 72.4
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 2.2e-93 347.1 319 62.1
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.3e-90 337.8 248 69.8
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 2.3e-87 327.0 301 54.5
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 5.8e-86 322.4 261 61.3
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 4.1e-84 316.2 204 77.0
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 1.1e-81 308.1 307 53.7
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 2.8e-72 276.9 308 53.6
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 2.3e-71 273.9 293 54.9
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 3.1e-71 273.5 282 50.7
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 1.7e-69 267.7 293 54.6
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 1.3e-66 258.1 194 68.6
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.5e-65 254.6 170 73.5
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 4.3e-65 253.1 283 48.1
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 2.8e-64 250.4 350 42.9
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 1.3e-58 231.5 242 56.6
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 8.1e-48 195.7 198 56.1
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 3.3e-41 173.7 226 51.3
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 7.9e-35 152.5 121 68.6
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 3.9e-34 150.2 296 34.8
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 6.5e-29 132.9 83 73.5
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 1.2e-27 128.6 84 76.2
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 3.9e-26 123.6 76 73.7
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 1.1e-23 115.5 73 78.1
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 1.7e-21 108.2 73 74.0
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 6.5e-21 106.3 70 65.7
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 6.9e-15 86.3 98 46.9
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 2.9e-13 80.9 57 66.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 5.1e-10 70.1 59 66.1


User provided reference genes

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