Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 5.3e-90 334.3 170 100.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 3.5e-81 305.1 157 97.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.0e-80 303.5 157 96.2
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.0e-80 303.5 157 96.2
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.0e-80 303.5 157 96.2
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 1.3e-80 303.1 157 96.8
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.9e-80 302.0 157 96.8
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.9e-80 302.0 157 96.8
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 6.5e-80 300.8 157 96.2
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.1e-79 300.1 157 95.5
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.5e-79 299.7 157 95.5
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.5e-79 299.7 157 96.2
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.9e-79 299.3 157 95.5
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 2.5e-79 298.9 157 94.9
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 2.5e-79 298.9 157 94.3
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 3.2e-79 298.5 157 94.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 95.5
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 94.9
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 95.5
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 94.9
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 94.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 95.5
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 94.3
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.5e-79 297.7 157 94.3
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 5.5e-79 297.7 158 94.3
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 5.5e-79 297.7 156 95.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 5.5e-79 297.7 157 94.3
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 5.5e-79 297.7 157 95.5
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 7.2e-79 297.4 157 93.6
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 7.2e-79 297.4 157 94.3
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.2e-78 296.6 157 94.9
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.6e-78 296.2 157 94.3
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.6e-78 296.2 157 94.9
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.1e-78 295.8 157 94.3
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.1e-78 295.8 157 94.3
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 2.1e-78 295.8 157 93.6
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 2.1e-78 295.8 157 93.6
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.1e-78 295.8 157 94.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 2.1e-78 295.8 156 94.2
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.6e-78 295.0 157 94.3
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.6e-78 295.0 157 94.3
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 3.6e-78 295.0 157 94.3
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.1e-78 294.3 163 92.6
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 8.0e-78 293.9 157 93.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 8.0e-78 293.9 156 94.2
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.4e-77 293.1 157 93.0
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.4e-77 293.1 157 94.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.4e-77 293.1 157 94.3
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 2.3e-77 292.4 157 93.0
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 2.3e-77 292.4 157 93.0
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 2.3e-77 292.4 157 93.0
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.0e-77 292.0 157 93.6
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.0e-77 292.0 157 93.6
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 5.2e-77 291.2 157 93.0
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 5.2e-77 291.2 157 93.6
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 5.2e-77 291.2 157 93.0
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 6.7e-77 290.8 156 91.7
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 6.7e-77 290.8 157 92.4
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.1e-76 290.0 154 94.8
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 3.3e-76 288.5 170 87.6
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 7.5e-76 287.3 157 90.4
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.3e-75 286.6 170 87.1
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.7e-75 286.2 155 91.6
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 2.2e-75 285.8 157 89.8
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.7e-75 285.0 157 93.0
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.8e-75 284.6 177 85.3
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 8.2e-75 283.9 152 92.1
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 8.2e-75 283.9 156 92.9
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.1e-74 283.5 153 92.2
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.1e-74 283.5 176 83.0
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.1e-74 281.6 157 91.1
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 7.0e-74 280.8 156 91.7
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 7.0e-74 280.8 150 93.3
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.2e-73 280.0 157 88.5
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.7e-72 276.2 157 90.4
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.2e-72 275.8 156 88.5
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.9e-72 275.4 157 87.3
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 3.8e-72 275.0 157 87.3
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.2e-70 270.0 162 87.7
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.8e-69 266.2 140 94.3
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 4.0e-69 265.0 139 95.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.2e-69 264.6 139 95.0
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.5e-68 263.1 140 92.9
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 3.4e-68 261.9 139 93.5
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 7.5e-68 260.8 138 94.9
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.3e-67 260.0 138 92.8
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 2.8e-67 258.8 134 97.0
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 2.0e-65 252.7 134 94.8
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.2e-64 249.2 134 94.0
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.9e-63 246.1 156 75.6
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 2.7e-62 242.3 128 95.3
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 3.0e-61 238.8 249 57.4
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 6.8e-61 237.7 157 79.6
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.4e-58 229.9 151 79.5
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 2.3e-56 222.6 157 76.4
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.9e-56 222.2 157 77.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.5e-55 219.2 156 75.0
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 3.6e-54 215.3 117 92.3
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.7e-51 206.5 220 57.7
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.2e-51 206.1 216 59.3
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 3.7e-51 205.3 110 94.5
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 3.7e-51 205.3 112 92.9
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.3e-51 204.1 109 95.4
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.8e-50 203.0 107 95.3
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.8e-50 203.0 107 95.3
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.4e-50 202.6 117 86.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 4.7e-46 188.3 157 59.2
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 4.3e-39 165.2 167 51.5
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.2e-38 163.7 103 82.5
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.1e-34 147.9 157 55.4
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 6.0e-33 144.8 117 66.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.0e-32 142.5 76 92.1
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 8.4e-27 124.4 62 95.2
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.6e-25 120.2 62 91.9
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 1.1e-23 114.0 90 67.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.5e-23 113.6 60 91.7
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 2.2e-19 99.8 62 77.4
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.4e-18 97.1 50 92.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 9.0e-13 77.8 38 89.5
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.4e-10 69.7 39 82.1


User provided reference genes

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