Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 6.4e-204 714.1 442 100.0
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 9.2e-110 401.4 447 58.8
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 1.6e-109 400.6 445 60.7
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.7e-109 399.8 448 58.9
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 9.5e-107 391.3 447 61.3
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 5.2e-105 385.6 443 55.3
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 2.0e-104 383.6 451 59.4
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 4.4e-104 382.5 452 61.1
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 5.8e-104 382.1 443 58.0
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 1.3e-103 380.9 449 60.1
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 4.9e-103 379.0 450 53.6
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 8.3e-103 378.3 445 60.7
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.9e-102 377.1 450 58.2
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.4e-102 376.7 448 53.1
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 3.2e-102 376.3 450 58.7
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 4.1e-102 375.9 450 52.4
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.2e-101 374.4 445 58.4
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 1.2e-101 374.4 446 56.1
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 2.7e-101 373.2 450 58.7
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.3e-100 370.9 444 57.7
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 1.3e-100 370.9 446 56.5
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 2.3e-100 370.2 445 57.5
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 1.5e-99 367.5 448 59.4
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 2.5e-99 366.7 450 55.1
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 7.3e-99 365.2 442 60.0
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.6e-98 364.0 444 57.2
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.6e-98 364.0 451 61.2
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 2.1e-98 363.6 440 53.6
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 3.6e-98 362.8 442 59.7
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 1.4e-97 360.9 457 50.8
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.8e-97 360.5 443 59.8
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.8e-97 360.5 443 59.8
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 1.8e-97 360.5 452 58.6
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 4.0e-97 359.4 459 51.2
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 4.0e-97 359.4 459 51.2
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 8.9e-97 358.2 443 58.9
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 1.2e-96 357.8 451 52.8
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 2.0e-96 357.1 465 49.0
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 2.6e-96 356.7 447 52.6
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 7.6e-96 355.1 442 58.1
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 9.9e-96 354.8 443 52.4
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 2.9e-95 353.2 462 51.7
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 3.8e-95 352.8 457 55.4
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 1.4e-94 350.9 451 57.0
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 3.2e-94 349.7 447 56.4
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.2e-93 347.8 442 59.0
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 1.2e-93 347.8 446 55.2
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 7.8e-93 345.1 424 61.3
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 7.8e-93 345.1 446 54.9
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 1.7e-92 344.0 447 55.7
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.7e-92 344.0 446 55.2
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 1.5e-91 340.9 446 49.6
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 3.3e-91 339.7 442 53.6
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 4.3e-91 339.3 460 50.9
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 4.8e-90 335.9 424 61.3
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 6.9e-89 332.0 450 50.7
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.2e-85 321.2 409 54.0
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 7.9e-85 318.5 449 57.2
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 2.3e-84 317.0 419 58.0
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 1.6e-82 310.8 451 46.8
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 1.4e-81 307.8 422 42.4
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 2.0e-80 303.9 451 42.1
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 6.4e-79 298.9 443 46.5
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 1.6e-77 294.3 443 53.0
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 6.0e-77 292.4 458 47.8
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 3.4e-72 276.6 452 49.6
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 6.5e-71 272.3 422 55.0
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 4.2e-70 269.6 449 50.3
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 5.7e-67 259.2 441 50.1
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.3e-66 258.1 433 39.3
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 1.5e-64 251.1 442 37.6
Glyma.08G110600 Glycine max HOM05D004237 ORTHO05D005002 7.6e-64 248.8 379 49.6
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 1.0e-63 248.4 232 53.9
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 5.5e-62 242.7 436 40.8
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 1.5e-56 224.6 442 43.9
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 8.8e-52 208.8 461 44.3
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 2.5e-51 207.2 146 66.4
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 2.5e-51 207.2 146 66.4
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 4.5e-48 196.4 454 48.2
Nitab4.5_0000697g0020 Nicotiana tabacum HOM05D004237 ORTHO05D005002 5.9e-48 196.1 346 51.2
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 2.6e-43 180.6 125 63.2
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 3.3e-43 180.3 290 38.6
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 4.4e-43 179.9 445 38.9
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 3.7e-42 176.8 261 42.1
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 1.1e-41 175.3 267 41.9
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 2.0e-40 171.0 153 52.3
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 3.5e-40 170.2 263 40.7
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 4.5e-40 169.9 268 39.2
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 4.5e-40 169.9 261 38.3
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 1.0e-39 168.7 130 61.5
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 1.0e-39 168.7 143 55.2
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 1.7e-39 167.9 186 45.2
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 2.2e-39 167.5 262 39.7
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 2.9e-39 167.2 296 37.8
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 5.0e-39 166.4 125 57.6
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 5.0e-39 166.4 125 62.4
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 5.0e-39 166.4 130 57.7
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 6.5e-39 166.0 132 59.8
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 8.5e-39 165.6 125 60.8
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 1.1e-38 165.2 263 37.6
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 1.5e-38 164.9 159 49.7
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.9e-38 164.5 125 56.8
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 1.9e-38 164.5 272 36.8
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.5e-38 164.1 125 61.6
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 2.5e-38 164.1 140 53.6
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 3.2e-38 163.7 259 39.0
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 3.2e-38 163.7 287 35.9
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 3.2e-38 163.7 139 54.0
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 3.2e-38 163.7 139 54.0
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 4.2e-38 163.3 269 38.7
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 4.2e-38 163.3 286 36.0
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 4.2e-38 163.3 219 44.3
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 4.2e-38 163.3 125 59.2
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 4.2e-38 163.3 125 59.2
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 4.2e-38 163.3 125 60.0
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 5.5e-38 162.9 124 60.5
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 5.5e-38 162.9 124 60.5
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 5.5e-38 162.9 171 49.1
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 5.5e-38 162.9 197 46.2
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 5.5e-38 162.9 284 38.7
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 7.2e-38 162.5 152 52.0
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 9.4e-38 162.2 140 52.1
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 9.4e-38 162.2 125 58.4
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 9.4e-38 162.2 220 40.5
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 1.2e-37 161.8 140 54.3
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 1.2e-37 161.8 125 59.2
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.6e-37 161.4 125 59.2
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 3.6e-37 160.2 125 59.2
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 4.7e-37 159.8 138 54.3
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 4.7e-37 159.8 125 58.4
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 6.1e-37 159.5 125 58.4
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 6.1e-37 159.5 289 35.6
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 6.1e-37 159.5 126 57.9
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 8.0e-37 159.1 215 42.3
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 8.0e-37 159.1 143 52.4
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 8.0e-37 159.1 180 47.2
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 8.0e-37 159.1 299 36.8
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 1.0e-36 158.7 125 58.4
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 1.4e-36 158.3 159 49.1
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.4e-36 158.3 130 56.2
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.3e-36 157.5 125 58.4
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 2.3e-36 157.5 125 56.8
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 2.3e-36 157.5 176 46.6
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 2.3e-36 157.5 125 57.6
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 3.0e-36 157.1 125 57.6
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 3.0e-36 157.1 167 46.1
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 4.0e-36 156.8 280 36.1
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 2.0e-35 154.5 125 56.0
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 2.0e-35 154.5 125 56.0
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 9.7e-35 152.1 303 37.0
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 3.7e-34 150.2 125 55.2
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 6.3e-34 149.4 269 37.2
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 2.4e-33 147.5 125 52.8
TPR.G11942 Trifolium pratense HOM05D004237 ORTHO05D005002 1.7e-23 114.8 78 67.9
SHI01026 Sapria himalayana HOM05D004237 ORTHO05D005002 2.5e-22 110.9 373 41.6
unitig_45.g31538 Utricularia gibba HOM05D004237 ORTHO05D005002 8.0e-21 105.9 227 30.8
unitig_578.g16512 Utricularia gibba HOM05D004237 ORTHO05D005002 8.0e-21 105.9 227 30.8
Lj6P390T29 Lonicera japonica HOM05D004237 ORTHO05D005002 1.4e-17 95.1 143 37.1
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 9.2e-09 65.9 58 55.2
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.0e-07 62.4 80 41.2
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 1.9e-06 58.2 70 40.0
FvH4_4g13413 Fragaria vesca HOM05D004237 ORTHO05D196496 5.6e-06 56.6 78 42.3
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 7.3e-06 56.2 91 39.6
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 7.3e-06 56.2 55 49.1


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