Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 0.0e+00 1159.8 590 100.0
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 4.9e-268 927.5 593 78.9
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 6.0e-266 920.6 593 78.6
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 5.1e-265 917.5 545 82.4
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 3.3e-264 914.8 591 78.5
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 1.1e-262 909.8 591 78.3
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 1.1e-262 909.8 544 81.8
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 5.3e-262 907.5 594 77.4
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 4.5e-261 904.4 595 77.3
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.7e-260 902.5 595 77.0
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 2.2e-260 902.1 594 78.1
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 2.2e-260 902.1 591 77.7
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.4e-259 899.4 541 81.3
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 3.2e-259 898.3 538 81.8
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.6e-258 896.0 541 81.0
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 6.0e-258 894.0 594 75.6
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 7.9e-258 893.6 595 76.8
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 1.0e-257 893.3 532 83.1
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 8.7e-257 890.2 590 76.9
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 2.5e-256 888.6 572 78.8
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 3.3e-256 888.3 547 80.3
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 3.3e-256 888.3 532 81.8
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 1.4e-254 882.9 546 78.9
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 1.8e-254 882.5 547 79.0
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.8e-254 882.5 596 75.8
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 3.1e-254 881.7 550 78.9
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 5.3e-254 880.9 526 82.3
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 9.0e-254 880.2 559 78.7
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 9.0e-254 880.2 596 75.7
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 9.0e-254 880.2 569 77.5
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 2.0e-253 879.0 586 75.3
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 2.0e-253 879.0 592 75.8
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 5.9e-253 877.5 564 77.0
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 1.0e-252 876.7 600 74.8
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 3.8e-252 874.8 551 78.2
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 8.4e-252 873.6 532 80.3
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 1.1e-251 873.2 544 79.8
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 4.2e-251 871.3 544 78.9
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 4.2e-251 871.3 592 75.0
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 5.5e-251 870.9 594 74.2
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 7.2e-251 870.5 536 79.7
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 1.2e-250 869.8 532 79.3
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 2.1e-250 869.0 594 75.4
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.5e-250 868.2 590 75.8
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 3.5e-250 868.2 593 75.2
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 3.5e-250 868.2 577 76.3
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 6.1e-250 867.5 589 74.5
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.0e-249 866.7 544 78.5
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.3e-249 866.3 524 80.9
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 3.0e-249 865.1 596 73.8
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 3.0e-249 865.1 596 73.8
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 5.1e-249 864.4 526 80.2
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.1e-248 863.2 518 80.5
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 1.1e-248 863.2 597 73.9
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.1e-248 863.2 594 73.2
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.3e-247 859.8 598 73.9
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 1.3e-247 859.8 599 72.6
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 2.8e-247 858.6 587 74.3
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 3.7e-247 858.2 521 80.4
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 2.4e-246 855.5 546 76.7
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 3.1e-246 855.1 595 72.8
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 9.0e-246 853.6 592 74.0
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 9.0e-246 853.6 589 73.0
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 1.2e-245 853.2 541 78.2
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 3.4e-245 851.7 596 73.3
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 3.4e-245 851.7 598 72.9
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 3.4e-245 851.7 598 72.9
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 1.3e-244 849.7 568 75.0
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 5.0e-244 847.8 590 73.7
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.2e-243 844.0 592 73.3
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.9e-242 840.5 592 73.3
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.9e-242 840.5 591 73.1
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.8e-241 839.3 520 79.6
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 8.8e-241 837.0 534 77.7
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 2.0e-240 835.9 587 72.9
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.3e-240 835.1 624 69.6
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 3.3e-240 835.1 534 77.5
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.8e-238 829.3 524 78.1
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.1e-235 820.1 589 73.2
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 6.1e-234 814.3 589 71.8
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 6.3e-231 804.3 518 75.9
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 1.8e-230 802.7 527 75.0
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.0e-230 800.8 626 68.2
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 1.7e-228 796.2 559 73.9
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.0e-225 786.9 525 74.9
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 2.3e-225 785.8 591 69.7
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 5.2e-225 784.6 517 77.4
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 8.8e-225 783.9 579 70.1
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.1e-224 783.5 536 73.9
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 1.4e-222 776.5 524 74.6
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 1.4e-222 776.5 461 79.6
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.6e-221 773.1 589 68.3
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 1.8e-217 759.6 493 75.9
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 2.3e-217 759.2 496 77.4
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 1.5e-216 756.5 521 73.1
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 5.7e-216 754.6 520 72.3
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 1.0e-212 743.8 442 81.4
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 7.0e-206 721.1 499 72.7
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 1.3e-204 716.8 517 71.4
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 3.8e-204 715.3 497 74.2
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.2e-202 710.3 448 79.0
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.4e-201 706.8 561 64.2
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 4.1e-198 695.3 589 64.3
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 2.3e-196 689.5 518 67.6
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.1e-195 687.2 505 67.7
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 1.9e-190 669.8 590 62.2
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 3.7e-183 645.6 383 80.7
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.3e-180 637.1 507 63.9
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 1.9e-166 590.1 447 64.0
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 2.4e-158 563.1 391 73.9
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 2.4e-121 440.3 367 59.4
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-96 355.9 253 70.0
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.8e-90 337.0 200 78.5
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 6.4e-66 256.1 274 50.0
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-57 227.6 206 54.4
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.5e-54 217.6 141 73.8
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 2.8e-53 214.2 143 75.5
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.6e-40 171.8 100 77.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 6.0e-40 169.9 100 79.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.2e-35 155.6 101 71.3
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 7.6e-27 126.3 109 61.5
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 2.1e-24 118.2 74 74.3
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.5e-24 117.5 66 78.8
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.3e-23 115.5 174 42.0
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 3.0e-23 114.4 105 58.1
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 1.1e-20 105.9 65 76.9
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 1.1e-20 105.9 65 76.9
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 1.5e-19 102.1 68 72.1
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 1.5e-19 102.1 68 72.1
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 7.2e-17 93.2 68 69.1
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.1e-14 85.9 54 75.9
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 2.2e-13 81.6 71 56.3
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.1e-06 59.3 38 71.1
CDE06G1756 Ceratophyllum demersum HOM05D005895 ORTHO05D007916 2.0e-06 58.5 32 84.4


User provided reference genes

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