Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.4e-120 436.4 245 100.0
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.4e-112 409.1 245 86.9
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 1.4e-86 323.6 248 73.8
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 3.9e-86 322.0 182 83.0
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 5.1e-86 321.6 243 69.5
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 6.7e-86 321.2 187 80.7
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 8.8e-86 320.9 187 82.4
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.5e-85 320.1 172 87.2
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 2.6e-85 319.3 181 82.3
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 3.3e-85 318.9 186 81.7
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 5.7e-85 318.2 182 83.0
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 5.7e-85 318.2 246 72.4
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 9.7e-85 317.4 188 81.9
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.3e-84 317.0 243 67.9
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 1.3e-84 317.0 246 69.1
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.3e-84 317.0 182 84.6
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 1.7e-84 316.6 181 84.0
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 2.2e-84 316.2 187 80.2
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 2.8e-84 315.8 243 69.1
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 4.1e-83 312.0 241 68.5
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 4.1e-83 312.0 187 80.2
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 4.1e-83 312.0 243 68.7
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 5.3e-83 311.6 188 79.8
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 6.9e-83 311.2 182 83.0
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 6.9e-83 311.2 184 79.9
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 9.1e-83 310.8 185 81.6
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 9.1e-83 310.8 179 82.7
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 2.0e-82 309.7 246 66.7
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.0e-82 309.7 190 78.9
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 2.0e-82 309.7 243 67.9
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 3.4e-82 308.9 179 81.0
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 3.4e-82 308.9 253 67.6
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.4e-82 308.9 244 67.2
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 4.5e-82 308.5 253 67.6
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 5.9e-82 308.1 186 78.5
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 7.7e-82 307.8 176 84.1
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 7.7e-82 307.8 187 79.1
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 7.7e-82 307.8 187 79.7
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 7.7e-82 307.8 186 76.9
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 7.7e-82 307.8 170 83.5
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.0e-81 307.4 169 84.0
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.3e-81 307.0 180 81.1
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.7e-81 306.6 252 68.3
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 3.8e-81 305.4 188 78.2
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 3.8e-81 305.4 246 64.2
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 5.0e-81 305.1 186 78.5
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 6.5e-81 304.7 186 77.4
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 6.5e-81 304.7 187 78.1
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 6.5e-81 304.7 241 70.1
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 1.1e-80 303.9 170 81.8
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.1e-80 303.9 180 80.0
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.1e-80 303.9 188 79.3
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.4e-80 303.5 251 65.3
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.9e-80 303.1 186 76.9
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 2.5e-80 302.8 180 79.4
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 3.2e-80 302.4 176 80.7
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 4.2e-80 302.0 181 79.0
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 7.2e-80 301.2 249 69.1
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 7.2e-80 301.2 182 78.0
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 9.4e-80 300.8 188 78.7
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.6e-79 300.1 185 77.3
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.6e-79 300.1 242 65.7
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.7e-79 299.3 186 77.4
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 4.7e-79 298.5 172 80.8
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.4e-78 297.0 184 76.6
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 1.4e-78 297.0 185 76.8
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 3.9e-78 295.4 189 75.7
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 5.2e-78 295.0 190 76.8
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 5.2e-78 295.0 190 76.8
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 6.7e-78 294.7 189 76.7
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 6.7e-78 294.7 189 76.7
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 6.7e-78 294.7 182 78.0
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 8.8e-78 294.3 187 77.0
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 2.0e-77 293.1 186 77.4
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 5.7e-77 291.6 181 77.9
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 5.7e-77 291.6 181 77.9
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 5.7e-77 291.6 183 77.0
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 6.3e-76 288.1 187 74.3
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 2.4e-75 286.2 187 73.8
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 7.0e-75 284.6 172 78.5
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 7.0e-75 284.6 172 78.5
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.2e-74 283.9 166 83.1
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 2.0e-74 283.1 191 74.3
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.2e-73 279.6 173 76.3
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 4.2e-72 275.4 180 73.9
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 1.8e-70 270.0 170 74.7
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 1.5e-69 266.9 182 73.1
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 2.0e-69 266.5 173 74.0
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 2.0e-69 266.5 173 74.0
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 3.3e-69 265.8 171 73.7
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 3.3e-69 265.8 185 70.3
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 3.3e-69 265.8 186 69.4
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 2.4e-67 259.6 169 77.5
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 2.4e-67 259.6 170 72.4
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 2.0e-66 256.5 152 77.6
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.0e-66 256.5 170 73.5
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 2.7e-66 256.1 185 64.9
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 5.9e-66 255.0 243 57.6
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 6.5e-65 251.5 178 65.7
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 6.5e-65 251.5 178 65.7
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.6e-63 246.9 169 71.6
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 2.3e-62 243.0 208 65.4
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.5e-61 240.4 140 80.0
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 2.0e-61 240.0 186 61.8
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 3.7e-60 235.7 179 60.9
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 1.6e-58 230.3 135 83.0
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.0e-58 229.9 132 84.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 2.5e-56 223.0 172 62.2
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.9e-48 196.8 126 74.6
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 5.7e-45 185.3 120 72.5
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.7e-44 182.6 124 74.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 6.2e-39 165.2 105 80.0
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 4.9e-28 129.0 170 40.6
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 7.3e-24 115.2 189 33.3
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.1e-23 113.6 78 70.5
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 7.1e-19 98.6 186 36.0
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 3.9e-09 66.2 50 60.0
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 1.1e-08 64.7 180 31.1
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 9.6e-08 61.6 195 27.2
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 1.6e-07 60.8 166 27.1
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 3.6e-07 59.7 195 26.7
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 4.8e-07 59.3 191 26.7


User provided reference genes

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