Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 0.0e+00 1416.7 840 100.0
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.8e-284 982.6 847 67.8
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 3.5e-283 978.4 867 67.1
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 4.0e-279 964.9 849 68.4
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 8.8e-279 963.8 833 69.1
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 3.4e-278 961.8 834 68.7
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.3e-277 959.9 856 69.0
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.7e-277 958.4 834 68.0
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 5.4e-276 954.5 854 64.5
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.0e-275 952.6 834 68.2
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 2.5e-273 945.7 835 64.4
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 3.6e-272 941.8 840 66.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 6.1e-272 941.0 839 67.7
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.8e-271 939.5 834 69.8
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 2.3e-271 939.1 844 65.5
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 3.4e-270 935.3 831 65.7
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.3e-269 933.3 865 63.8
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 8.3e-269 930.6 860 62.3
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.9e-265 919.5 834 65.7
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.1e-263 912.1 825 65.6
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.5e-262 909.8 826 65.5
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 7.5e-262 907.5 854 63.2
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 6.4e-261 904.4 824 62.3
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 6.4e-261 904.4 832 67.7
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.4e-260 903.3 840 65.0
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.5e-259 898.7 823 64.6
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.5e-259 898.7 840 61.8
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.6e-259 898.3 845 65.9
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.1e-257 893.6 831 62.9
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.5e-257 893.3 850 63.3
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.9e-257 892.9 838 65.8
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.5e-257 892.5 840 64.0
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.8e-255 886.3 840 67.3
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 4.0e-255 885.2 843 62.6
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 6.8e-255 884.4 831 60.9
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 5.8e-254 881.3 842 62.7
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 9.8e-254 880.6 844 60.4
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 2.2e-253 879.4 847 60.1
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 2.2e-253 879.4 812 63.3
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 2.9e-253 879.0 840 65.0
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.7e-253 878.6 840 63.8
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 4.9e-253 878.2 842 61.8
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 6.4e-253 877.9 840 62.4
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 8.3e-253 877.5 846 62.1
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 3.2e-252 875.5 847 62.0
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.2e-251 873.6 831 62.7
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.6e-251 873.2 835 61.3
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.0e-251 871.3 840 63.5
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.3e-250 870.2 843 63.3
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 6.6e-250 867.8 836 61.6
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 6.6e-250 867.8 854 60.3
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.1e-249 867.1 837 59.6
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 7.3e-249 864.4 844 60.9
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 1.6e-248 863.2 837 62.7
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 3.6e-248 862.1 816 65.4
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.4e-247 860.1 836 58.6
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 2.3e-247 859.4 832 62.7
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 8.9e-247 857.4 865 58.8
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 1.5e-246 856.7 841 61.6
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.4e-246 855.1 845 60.5
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 5.8e-246 854.7 830 59.6
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 9.9e-246 854.0 843 60.1
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.7e-245 853.2 845 62.2
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.2e-245 852.8 847 60.7
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.6e-243 846.7 837 62.6
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 5.1e-242 841.6 831 63.1
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 1.5e-241 840.1 837 64.6
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 4.3e-241 838.6 835 62.8
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 9.6e-241 837.4 823 63.1
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.2e-240 834.7 863 58.4
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 6.2e-240 834.7 831 61.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 7.6e-238 827.8 836 58.7
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 1.3e-237 827.0 838 58.9
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 7.8e-235 817.8 845 57.2
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 5.1e-234 815.1 824 58.4
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.3e-232 810.4 837 59.3
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 2.8e-232 809.3 846 57.1
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.9e-229 798.5 840 56.9
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.4e-229 798.1 897 57.9
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 4.2e-228 795.4 795 59.7
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 8.7e-226 787.7 848 56.0
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 5.8e-222 775.0 841 56.4
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 3.7e-216 755.7 786 58.1
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 6.9e-215 751.5 702 66.0
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.6e-214 748.0 827 53.7
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.1e-210 735.3 855 55.7
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 1.1e-209 734.2 846 57.2
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 2.6e-206 723.0 846 55.9
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.5e-204 716.5 848 53.9
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.5e-203 712.6 875 49.6
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 6.1e-203 711.8 846 54.7
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 3.0e-202 709.5 846 54.6
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 8.7e-202 708.0 675 63.9
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.4e-199 699.9 812 53.6
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 1.1e-196 691.0 845 53.7
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 4.2e-196 689.1 846 55.1
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 9.4e-196 688.0 848 52.7
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 2.3e-194 683.3 851 51.8
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.0e-193 680.2 848 55.3
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.3e-189 667.5 836 50.7
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 2.9e-189 666.4 836 51.0
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.9e-188 663.7 839 52.8
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 7.2e-188 661.8 843 51.6
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-187 661.0 836 50.5
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.6e-187 660.6 844 50.5
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 3.8e-181 639.4 922 48.0
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.4e-170 604.4 851 45.4
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.1e-167 594.7 837 46.4
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.2e-166 591.3 887 43.7
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.9e-164 583.9 593 63.6
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.6e-163 579.7 437 68.9
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.4e-161 573.2 788 49.0
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.2e-155 554.7 655 57.9
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 6.0e-142 509.2 675 50.4
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.7e-141 507.7 712 46.9
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 8.3e-136 488.8 470 61.9
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.1e-132 478.4 490 64.3
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 2.8e-131 473.8 585 56.4
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 3.6e-131 473.4 771 45.0
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 1.2e-126 458.4 880 41.6
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.6e-126 458.0 535 52.1
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.5e-124 451.4 888 39.0
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 6.4e-120 436.0 452 65.5
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 1.6e-118 431.4 348 69.8
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.3e-116 423.3 538 52.8
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 6.7e-109 399.4 279 72.4
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.8e-101 374.8 536 45.3
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 5.6e-100 369.8 282 70.6
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.5e-95 354.4 897 37.0
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 4.2e-95 353.6 457 46.6
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 3.0e-93 347.4 553 40.1
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 1.5e-92 345.1 828 36.5
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 5.1e-85 320.1 449 46.1
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 6.5e-80 303.1 825 32.1
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.6e-78 298.5 687 36.5
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 7.5e-60 236.5 371 49.3
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 4.1e-58 230.7 503 32.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.9e-55 221.9 183 69.9
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.2e-55 221.1 337 53.1
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.7e-54 218.0 413 46.2
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.4e-50 203.8 426 37.8
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.4e-42 177.2 347 39.2
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-41 175.3 328 41.5
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 9.5e-39 166.4 134 62.7
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 3.7e-35 154.5 142 62.0
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 1.6e-33 149.1 137 60.6
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.6e-30 139.0 134 63.4
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.2e-26 123.2 130 55.4
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.8e-21 109.0 133 54.1
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 6.8e-21 107.1 94 57.4
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.8e-21 107.1 157 49.0
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 2.0e-20 105.5 96 58.3
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.5e-20 103.6 626 24.1
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.3e-19 100.1 136 47.1
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-18 97.8 325 31.1
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-17 95.9 380 29.2
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.6e-17 94.4 122 47.5
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.8e-17 93.6 80 65.0
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.1e-16 90.9 85 56.5
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.1e-15 89.7 80 60.0
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-15 88.6 138 44.9
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.5e-15 86.7 281 31.3
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 3.6e-14 84.7 82 54.9
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.2e-14 84.0 163 41.1
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 3.1e-13 81.6 136 42.6
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.8e-13 80.5 80 56.2
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.9e-10 72.4 72 54.2
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 4.1e-10 71.2 87 43.7
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 3.5e-09 68.2 51 72.5
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 4.6e-09 67.8 87 44.8
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 6.0e-09 67.4 124 41.9
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 7.8e-09 67.0 41 75.6
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 1.7e-08 65.9 86 51.2
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 3.0e-08 65.1 104 39.4
HPP92_006544 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-07 62.0 167 34.1
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.6e-07 60.8 137 32.1
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-06 59.3 38 76.3
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 2.1e-06 58.9 34 85.3
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.8e-06 58.5 65 49.2
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 6.2e-06 57.4 150 39.3


User provided reference genes

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