Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.9e-32 142.9 72 100.0
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.6e-28 129.8 72 91.7
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.6e-28 129.8 72 91.7
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.1e-28 129.4 72 91.7
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 4.8e-28 128.3 72 88.9
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 6.2e-28 127.9 72 91.7
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.4e-24 116.7 72 83.3
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 7.1e-24 114.4 72 81.9
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.2e-23 113.6 72 81.9
Eucgr.H02228 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.1e-20 102.8 72 77.8
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 2.8e-12 75.9 72 52.8
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 6.3e-12 74.7 64 53.1
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 6.9e-11 71.2 69 52.2
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 1.5e-10 70.1 61 57.4
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 3.4e-10 68.9 68 50.0
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 4.5e-10 68.6 72 51.4
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 5.9e-10 68.2 68 52.9
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 2.2e-09 66.2 51 56.9
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 2.2e-09 66.2 66 45.5
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 3.8e-09 65.5 51 58.8
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 6.5e-09 64.7 65 50.8
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 2.5e-08 62.8 66 48.5
Prupe.3G151900 Prunus persica HOM05D008343 ORTHO05D009841 5.5e-08 61.6 47 63.8
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 1.2e-07 60.5 71 47.9
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.1e-07 59.7 64 48.4
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.1e-07 59.7 56 51.8
Cpa.g.sc6.93 Carica papaya HOM05D008343 ORTHO05D009841 4.6e-07 58.5 66 48.5
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 6.1e-07 58.2 61 45.9
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 6.1e-07 58.2 53 52.8
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 6.1e-07 58.2 59 54.2
TAR376G1160 Trochodendron aralioides HOM05D008343 ORTHO05D009841 7.9e-07 57.8 53 54.7
Lalb_Chr16g0388911 Lupinus albus HOM05D008343 ORTHO05D009841 2.3e-06 56.2 64 43.8
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.3e-06 56.2 50 50.0
Nn1g04691 Nelumbo nucifera HOM05D008343 ORTHO05D009841 3.0e-06 55.8 59 49.2
Eucgr.H02232 Eucalyptus grandis HOM05D034744 ORTHO05D011351 3.9e-06 55.5 73 43.8
Eucgr.H02235 Eucalyptus grandis HOM05D034744 ORTHO05D011351 3.9e-06 55.5 73 43.8
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 3.9e-06 55.5 62 46.8
TAR376G1156 Trochodendron aralioides HOM05D008343 ORTHO05D009841 3.9e-06 55.5 61 52.5
FvH4_1g16830 Fragaria vesca HOM05D014781 ORTHO05D009841 5.1e-06 55.1 68 44.1
FAN19G0512 Fragaria x ananassa HOM05D014781 ORTHO05D009841 5.1e-06 55.1 68 44.1
FAN26G0261 Fragaria x ananassa HOM05D014781 ORTHO05D009841 5.1e-06 55.1 68 44.1
Phvul.003G239800 Phaseolus vulgaris HOM05D008343 ORTHO05D009841 5.1e-06 55.1 64 50.0
FAN28G1184 Fragaria x ananassa HOM05D014781 ORTHO05D009841 6.7e-06 54.7 68 42.6
Glyma.17G166600 Glycine max HOM05D008343 ORTHO05D009841 6.7e-06 54.7 64 46.9
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 6.7e-06 54.7 63 42.9
RcHm_v2.0_Chr2g0106731 Rosa chinensis HOM05D014781 ORTHO05D009841 8.7e-06 54.3 67 44.8


User provided reference genes

Program Settings