Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.4e-32 142.9 72 100.0
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.5e-31 138.3 72 97.2
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.5e-31 138.3 72 97.2
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.0e-30 136.7 72 94.4
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 6.5e-30 134.0 72 94.4
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 4.7e-28 127.9 72 91.7
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 4.4e-26 121.3 72 86.1
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.2e-25 119.0 72 84.7
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.7e-25 118.2 72 84.7
Eucgr.H02228 Eucalyptus grandis HOM05D008343 ORTHO05D009841 4.2e-21 104.8 72 79.2
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 1.7e-14 82.8 72 55.6
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 1.1e-13 80.1 64 54.7
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 1.2e-12 76.6 69 53.6
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 3.6e-12 75.1 61 59.0
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 6.1e-12 74.3 72 54.2
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 6.1e-12 74.3 68 51.5
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 1.0e-11 73.6 66 48.5
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 8.8e-11 70.5 58 51.7
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 1.5e-10 69.7 58 53.4
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 2.6e-10 68.9 65 53.8
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 7.5e-10 67.4 66 50.0
Glyma.17G166600 Glycine max HOM05D008343 ORTHO05D009841 1.3e-09 66.6 64 53.1
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 1.3e-09 66.6 63 49.2
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.7e-09 66.2 64 51.6
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.2e-09 65.9 56 55.4
Glyma.05G099300 Glycine max HOM05D008343 ORTHO05D009841 4.9e-09 64.7 64 54.7
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 6.3e-09 64.3 53 56.6
FvH4_1g16830 Fragaria vesca HOM05D014781 ORTHO05D009841 1.1e-08 63.5 68 47.1
FAN19G0512 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.1e-08 63.5 68 47.1
FAN26G0261 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.1e-08 63.5 68 47.1
FAN28G1184 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.4e-08 63.2 68 45.6
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 1.4e-08 63.2 61 47.5
Prupe.3G151900 Prunus persica HOM05D008343 ORTHO05D009841 1.4e-08 63.2 47 63.8
RcHm_v2.0_Chr2g0106731 Rosa chinensis HOM05D014781 ORTHO05D009841 1.8e-08 62.8 67 47.8
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.8e-08 62.8 66 48.5
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 1.8e-08 62.8 71 47.9
FAN28G2323 Fragaria x ananassa HOM05D014781 ORTHO05D009841 3.1e-08 62.0 68 45.6
Lalb_Chr16g0388911 Lupinus albus HOM05D008343 ORTHO05D009841 3.1e-08 62.0 64 46.9
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 4.1e-08 61.6 62 50.0
Cpa.g.sc6.93 Carica papaya HOM05D008343 ORTHO05D009841 7.0e-08 60.8 67 50.7
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 7.0e-08 60.8 50 52.0
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 9.2e-08 60.5 75 44.0
THA.LOC104813832 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 9.2e-08 60.5 61 52.5
Phvul.003G239800 Phaseolus vulgaris HOM05D008343 ORTHO05D009841 1.2e-07 60.1 64 53.1
Eucgr.H01291 Eucalyptus grandis HOM05D034744 ORTHO05D011351 1.6e-07 59.7 72 48.6
Thecc.01G063900 Theobroma cacao HOM05D018273 ORTHO05D009841 1.6e-07 59.7 62 50.0
Eucgr.H02232 Eucalyptus grandis HOM05D034744 ORTHO05D011351 2.0e-07 59.3 73 46.6
Eucgr.H02235 Eucalyptus grandis HOM05D034744 ORTHO05D011351 2.0e-07 59.3 73 46.6
Lalb_Chr05g0226171 Lupinus albus HOM05D008343 ORTHO05D009841 2.0e-07 59.3 64 46.9
Nn1g04691 Nelumbo nucifera HOM05D008343 ORTHO05D009841 2.0e-07 59.3 59 49.2
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.0e-07 59.3 75 45.3
CiPaw.01G012500 Carya illinoinensis HOM05D008343 ORTHO05D009841 3.5e-07 58.5 77 50.6
THA.LOC104807602 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 3.5e-07 58.5 66 50.0
Gohir.A10G217550 Gossypium hirsutum HOM05D018273 ORTHO05D009841 4.5e-07 58.2 62 50.0
THA.LOC109116433 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 4.5e-07 58.2 66 48.5
Aqoxy6G02858 Aquilegia oxysepala HOM05D008343 ORTHO05D009841 5.9e-07 57.8 74 41.9
COL.COLO4_11489 Corchorus olitorius HOM05D018273 ORTHO05D009841 5.9e-07 57.8 64 51.6
Peaxi162Scf00365g00051 Petunia axillaris HOM05D011430 ORTHO05D009841 5.9e-07 57.8 63 52.4
TAR376G1156 Trochodendron aralioides HOM05D008343 ORTHO05D009841 7.7e-07 57.4 49 61.2
VMungo0251G2240 Vigna mungo HOM05D008343 ORTHO05D009841 7.7e-07 57.4 79 44.3
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.0e-06 57.0 47 57.4
Carub.0007s0300 Capsella rubella HOM05D008734 ORTHO05D010780 1.7e-06 56.2 67 50.7
Gorai.011G257600 Gossypium raimondii HOM05D018273 ORTHO05D009841 1.7e-06 56.2 62 48.4
Manes.12G110633 Manihot esculenta HOM05D008343 ORTHO05D009841 1.7e-06 56.2 62 48.4
Nn1g04695 Nelumbo nucifera HOM05D008343 ORTHO05D009841 1.7e-06 56.2 65 49.2
Ciclev10027017m.g Citrus clementina HOM05D008343 ORTHO05D009841 2.3e-06 55.8 72 41.7
Sed0018335 Sechium edule HOM05D024155 ORTHO05D010780 2.3e-06 55.8 63 52.4
TAR376G1160 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.3e-06 55.8 51 52.9
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 5.0e-06 54.7 59 50.8
AL7G13562 Arabidopsis lyrata HOM05D008734 ORTHO05D010780 8.6e-06 53.9 65 46.2
MELO3C007588.2 Cucumis melo HOM05D024155 ORTHO05D010780 8.6e-06 53.9 76 44.7


User provided reference genes

Program Settings