Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.8e-34 148.3 118 100.0
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.8e-34 148.3 118 100.0
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.1e-33 146.7 118 98.3
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.0e-31 140.2 72 97.2
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.0e-31 138.7 72 97.2
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.1e-28 130.2 72 91.7
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 6.9e-28 127.5 72 88.9
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.4e-27 125.2 72 87.5
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.8e-27 124.4 72 87.5
Eucgr.H02228 Eucalyptus grandis HOM05D008343 ORTHO05D009841 6.6e-23 110.9 72 81.9
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 1.1e-14 83.6 72 55.6
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 5.6e-14 81.3 64 54.7
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 6.2e-13 77.8 69 53.6
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 1.8e-12 76.3 61 59.0
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 3.1e-12 75.5 72 54.2
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 3.1e-12 75.5 68 51.5
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 1.2e-11 73.6 66 48.5
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 7.6e-11 70.9 58 51.7
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 1.3e-10 70.1 65 53.8
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 1.3e-10 70.1 58 53.4
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 6.4e-10 67.8 66 50.0
Glyma.17G166600 Glycine max HOM05D008343 ORTHO05D009841 6.4e-10 67.8 64 54.7
Glyma.05G099300 Glycine max HOM05D008343 ORTHO05D009841 1.1e-09 67.0 64 56.2
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.1e-09 67.0 64 51.6
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 1.1e-09 67.0 71 49.3
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.4e-09 66.6 56 55.4
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.9e-09 66.2 68 50.0
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 4.2e-09 65.1 53 56.6
Cpa.g.sc6.93 Carica papaya HOM05D008343 ORTHO05D009841 7.1e-09 64.3 66 51.5
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 7.1e-09 64.3 63 47.6
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 9.3e-09 63.9 61 47.5
Prupe.3G151900 Prunus persica HOM05D008343 ORTHO05D009841 1.2e-08 63.5 47 63.8
Lalb_Chr16g0388911 Lupinus albus HOM05D008343 ORTHO05D009841 2.7e-08 62.4 64 46.9
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.7e-08 62.4 62 50.0
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.7e-08 62.4 52 51.9
Eucgr.H01291 Eucalyptus grandis HOM05D034744 ORTHO05D011351 6.0e-08 61.2 116 61.2
Lalb_Chr05g0226171 Lupinus albus HOM05D008343 ORTHO05D009841 6.0e-08 61.2 64 46.9
FAN28G1184 Fragaria x ananassa HOM05D014781 ORTHO05D009841 7.9e-08 60.8 68 44.1
Phvul.003G239800 Phaseolus vulgaris HOM05D008343 ORTHO05D009841 1.0e-07 60.5 64 53.1
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.0e-07 60.5 75 44.0
CiPaw.01G012500 Carya illinoinensis HOM05D008343 ORTHO05D009841 1.8e-07 59.7 77 50.6
FAN28G2323 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.8e-07 59.7 68 44.1
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.8e-07 59.7 75 45.3
Eucgr.H02232 Eucalyptus grandis HOM05D034744 ORTHO05D011351 2.3e-07 59.3 73 46.6
Eucgr.H02235 Eucalyptus grandis HOM05D034744 ORTHO05D011351 2.3e-07 59.3 73 46.6
FvH4_1g16830 Fragaria vesca HOM05D014781 ORTHO05D009841 2.3e-07 59.3 68 44.1
FAN19G0512 Fragaria x ananassa HOM05D014781 ORTHO05D009841 2.3e-07 59.3 68 44.1
FAN26G0261 Fragaria x ananassa HOM05D014781 ORTHO05D009841 2.3e-07 59.3 68 44.1
THA.LOC104813832 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 2.3e-07 59.3 59 52.5
Peaxi162Scf00365g00051 Petunia axillaris HOM05D011430 ORTHO05D009841 3.0e-07 58.9 63 52.4
Thecc.01G063900 Theobroma cacao HOM05D018273 ORTHO05D009841 3.0e-07 58.9 62 50.0
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 3.0e-07 58.9 59 52.5
TAR376G1160 Trochodendron aralioides HOM05D008343 ORTHO05D009841 3.9e-07 58.5 53 54.7
Nn1g04691 Nelumbo nucifera HOM05D008343 ORTHO05D009841 5.1e-07 58.2 59 49.2
RcHm_v2.0_Chr2g0106731 Rosa chinensis HOM05D014781 ORTHO05D009841 5.1e-07 58.2 65 46.2
Aqoxy6G02858 Aquilegia oxysepala HOM05D008343 ORTHO05D009841 6.7e-07 57.8 74 41.9
THA.LOC104807602 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 6.7e-07 57.8 64 50.0
TAR376G1156 Trochodendron aralioides HOM05D008343 ORTHO05D009841 6.7e-07 57.8 49 61.2
VMungo0251G2240 Vigna mungo HOM05D008343 ORTHO05D009841 6.7e-07 57.8 79 44.3
THA.LOC109116433 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 8.7e-07 57.4 64 48.4
COL.COLO4_11489 Corchorus olitorius HOM05D018273 ORTHO05D009841 1.1e-06 57.0 64 51.6
Nn1g04695 Nelumbo nucifera HOM05D008343 ORTHO05D009841 1.1e-06 57.0 65 47.7
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.1e-06 57.0 47 57.4
Manes.12G110633 Manihot esculenta HOM05D008343 ORTHO05D009841 1.5e-06 56.6 62 48.4
Solyc03g044180.1 Solanum lycopersicum HOM05D011430 ORTHO05D009841 1.9e-06 56.2 63 49.2
MELO3C007588.2 Cucumis melo HOM05D024155 ORTHO05D010780 2.5e-06 55.8 76 44.7
Ciclev10027017m.g Citrus clementina HOM05D008343 ORTHO05D009841 3.3e-06 55.5 72 41.7
Sed0018335 Sechium edule HOM05D024155 ORTHO05D010780 3.3e-06 55.5 63 54.0
PGSC0003DMG400014879 Solanum tuberosum HOM05D011430 ORTHO05D009841 3.3e-06 55.5 63 49.2
Gohir.A10G217550 Gossypium hirsutum HOM05D018273 ORTHO05D009841 4.3e-06 55.1 62 48.4
Gorai.011G257600 Gossypium raimondii HOM05D018273 ORTHO05D009841 4.3e-06 55.1 62 48.4
Peaxi162Scf00365g00065 Petunia axillaris HOM05D011430 ORTHO05D009841 9.6e-06 53.9 63 49.2


User provided reference genes

Program Settings