Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 9.6e-206 719.9 363 100.0
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.4e-164 583.2 383 81.5
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.1e-160 567.8 319 92.2
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.3e-157 557.8 357 82.4
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.0e-150 536.2 343 82.5
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.8e-128 462.6 377 68.4
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.7e-123 446.0 284 82.7
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.7e-114 416.8 267 82.0
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.8e-111 406.8 362 66.9
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.8e-111 404.8 302 73.8
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 3.3e-105 386.0 383 54.8
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.6e-105 385.2 276 76.4
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 1.6e-104 383.6 377 57.3
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 2.4e-103 379.8 375 56.5
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 1.2e-102 377.5 376 56.1
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 7.6e-102 374.8 408 53.2
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 4.9e-101 372.1 383 55.4
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 3.2e-100 369.4 395 53.7
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 1.6e-99 367.1 370 54.9
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 8.7e-98 361.3 342 57.9
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 5.6e-97 358.6 375 53.6
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 5.6e-97 358.6 385 54.5
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 7.3e-97 358.2 384 53.4
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 4.0e-95 352.4 387 50.9
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 5.8e-94 348.6 375 53.6
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 1.7e-93 347.1 382 54.2
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 3.8e-93 345.9 386 52.1
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.4e-93 344.7 331 63.4
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 8.4e-93 344.7 386 51.8
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 1.4e-92 344.0 346 56.6
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 1.9e-92 343.6 376 52.9
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 2.4e-92 343.2 379 53.0
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 3.2e-92 342.8 386 51.8
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 4.2e-92 342.4 366 53.3
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 1.6e-91 340.5 384 52.3
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 4.6e-91 339.0 375 50.9
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 1.3e-90 337.4 299 59.5
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 6.7e-90 335.1 385 52.2
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 1.5e-89 334.0 378 52.1
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 3.3e-89 332.8 384 52.1
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 3.3e-89 332.8 383 51.7
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 4.3e-89 332.4 381 51.2
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 7.4e-89 331.6 375 52.5
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 1.3e-88 330.9 375 50.4
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 2.1e-88 330.1 383 51.2
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 1.8e-87 327.0 389 50.9
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 4.0e-87 325.9 373 51.2
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 4.0e-87 325.9 318 56.3
Potri.005G140500 Populus trichocarpa HOM05D006446 ORTHO05D007832 4.5e-86 322.4 311 57.9
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 7.6e-86 321.6 362 51.4
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 7.6e-86 321.6 379 51.2
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 2.9e-85 319.7 374 50.3
Nitab4.5_0001169g0030 Nicotiana tabacum HOM05D006446 ORTHO05D007832 3.8e-85 319.3 372 50.8
Solyc03g044370.3 Solanum lycopersicum HOM05D006446 ORTHO05D007832 3.8e-85 319.3 335 53.7
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 6.4e-85 318.5 383 49.3
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 1.1e-84 317.8 371 51.5
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 1.1e-84 317.8 339 54.3
Lj4A152T18 Lonicera japonica HOM05D006446 ORTHO05D007832 1.4e-84 317.4 335 54.0
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 1.9e-84 317.0 365 51.2
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 3.2e-84 316.2 375 50.1
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 3.2e-84 316.2 364 50.3
DCAR_010875 Daucus carota HOM05D006446 ORTHO05D007832 4.2e-84 315.8 340 53.2
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 9.3e-84 314.7 258 70.2
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 1.6e-83 313.9 383 48.8
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 2.1e-83 313.5 338 53.0
Oeu017452.1 Olea europaea HOM05D006446 ORTHO05D007832 3.5e-83 312.8 379 48.5
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 1.0e-82 311.2 359 51.0
Eucgr.H02090 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.8e-82 310.5 268 65.3
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 6.7e-82 308.5 339 51.0
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 2.5e-81 306.6 265 60.8
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 3.3e-81 306.2 384 48.4
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.3e-81 306.2 263 69.2
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 4.3e-81 305.8 366 50.0
HanXRQChr15g0490771 Helianthus annuus HOM05D006446 ORTHO05D007832 1.4e-79 300.8 374 48.9
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 4.0e-79 299.3 265 60.0
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 5.3e-79 298.9 387 48.6
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 4.5e-78 295.8 380 46.8
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 5.8e-78 295.4 438 42.9
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 3.8e-77 292.7 366 48.1
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.4e-76 290.8 230 73.0
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 3.5e-75 286.2 391 47.8
Haze_15372 Corylus avellana HOM05D006446 ORTHO05D007832 4.6e-75 285.8 255 60.4
CDE01G0083 Ceratophyllum demersum HOM05D006446 ORTHO05D007832 7.9e-75 285.0 341 50.1
EL10Ac6g15719 Beta vulgaris HOM05D006446 ORTHO05D007832 2.5e-73 280.0 322 52.2
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 5.7e-73 278.9 369 47.2
Ah.03g145380 Amaranthus hybridus HOM05D006446 ORTHO05D007832 1.3e-72 277.7 350 46.6
PGSC0003DMG402034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 1.2e-70 271.2 250 57.2
vmacro17962 Vaccinium macrocarpon HOM05D006446 ORTHO05D007832 3.4e-70 269.6 316 51.6
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 4.5e-70 269.2 337 47.5
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 1.0e-69 268.1 302 52.0
HPP92_014795 Vanilla planifolia HOM05D006446 ORTHO05D007832 1.3e-69 267.7 346 47.7
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 3.8e-69 266.2 299 51.8
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 7.2e-68 261.9 387 45.5
SGA_v2.0_scaffold143G35805 Striga asiatica HOM05D006446 ORTHO05D007832 5.7e-65 252.3 384 44.8
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 1.1e-63 248.1 331 46.8
Hund16350 Selenicereus undatus HOM05D006446 ORTHO05D007832 1.0e-61 241.5 374 42.2
Zm00001eb066800 Zea mays HOM05D006446 ORTHO05D007832 2.7e-59 233.4 335 44.8
PSO170G5547 Papaver somniferum HOM05D006446 ORTHO05D007832 6.1e-59 232.3 325 45.5
AUR62003910 Chenopodium quinoa HOM05D006446 ORTHO05D007832 3.7e-56 223.0 335 42.7
PSO210G7690 Papaver somniferum HOM05D006446 ORTHO05D007832 2.4e-55 220.3 303 45.2
AagrBONN_evm.TU.Sc2ySwM_368.596 Anthoceros agrestis HOM05D006446 ORTHO05D007832 3.1e-55 219.9 347 40.3
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 3.1e-55 219.9 331 44.1
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 1.5e-54 217.6 374 40.4
Mapoly0012s0095 Marchantia polymorpha HOM05D006446 ORTHO05D007832 1.8e-50 204.1 345 39.1
Pp3c2_9710 Physcomitrium patens HOM05D006446 ORTHO05D007832 5.7e-49 199.1 321 38.9
Pp3c17_8570 Physcomitrium patens HOM05D006446 ORTHO05D007832 7.2e-44 182.2 326 36.2
Os04g0670400 Oryza sativa ssp. japonica HOM05D006446 ORTHO05D007832 3.6e-43 179.9 179 53.6
AUR62001902 Chenopodium quinoa HOM05D006446 ORTHO05D007832 8.0e-43 178.7 229 45.9
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.1e-27 125.9 91 74.7
Eucgr.H01699 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.0e-26 123.2 80 83.8
Cre05.g246050 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 4.4e-25 119.8 248 34.3
MCO10G335 Micromonas commoda HOM05D006446 ORTHO05D007832 3.5e-22 110.2 236 34.7
Cre09.g408825 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 4.3e-20 103.2 165 36.4
SEGI_14722 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 4.7e-19 99.8 193 37.3
SEGI_09227 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 4.9e-16 89.7 112 42.9
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 3.9e-13 80.1 245 26.9
PGSC0003DMG400000946 Solanum tuberosum HOM05D006446 ORTHO05D007832 6.4e-08 62.8 44 72.7
PRCOL_00000140 Prasinoderma coloniale HOM05D005315 ORTHO05D007832 8.3e-08 62.4 123 31.7
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 7.0e-07 59.3 103 37.9
Carub.0006s0320 Capsella rubella HOM05D001005 ORTHO05D000836 4.6e-06 56.6 138 29.0


User provided reference genes

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