Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02011 Eucalyptus grandis HOM05D000955 ORTHO05D003340 1.1e-40 169.5 84 100.0
Eucgr.H01655 Eucalyptus grandis HOM05D000955 ORTHO05D003340 1.5e-37 159.1 87 93.1
Dinv39861 Davidia involucrata HOM05D000955 ORTHO05D003340 2.1e-18 95.5 66 66.7
Cfa004009 Carpinus fangiana HOM05D000955 ORTHO05D003340 3.3e-16 88.2 66 59.1
Prupe.7G134600 Prunus persica HOM05D000955 ORTHO05D003340 2.8e-15 85.1 66 59.1
Rhsim08G0101200 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.8e-15 85.1 80 51.2
Cpa.g.sc55.161 Carica papaya HOM05D000955 ORTHO05D003340 4.7e-15 84.3 66 59.1
Manes.13G127500 Manihot esculenta HOM05D000955 ORTHO05D003340 8.1e-15 83.6 66 54.5
Gohir.A12G070700 Gossypium hirsutum HOM05D000955 ORTHO05D003340 5.2e-14 80.9 84 47.6
Gohir.D12G068600 Gossypium hirsutum HOM05D000955 ORTHO05D003340 5.2e-14 80.9 84 47.6
Gorai.008G075000 Gossypium raimondii HOM05D000955 ORTHO05D003340 5.2e-14 80.9 84 47.6
Manes.12G102501 Manihot esculenta HOM05D000955 ORTHO05D003340 5.2e-14 80.9 66 57.6
Thecc.01G054500 Theobroma cacao HOM05D000955 ORTHO05D003340 6.8e-14 80.5 84 45.2
RcHm_v2.0_Chr2g0105311 Rosa chinensis HOM05D000955 ORTHO05D003340 8.9e-14 80.1 66 54.5
FAN19G2583 Fragaria x ananassa HOM05D000955 ORTHO05D003340 1.2e-13 79.7 66 54.5
FAN26G2503 Fragaria x ananassa HOM05D000955 ORTHO05D003340 1.2e-13 79.7 66 54.5
Nn5g30251 Nelumbo nucifera HOM05D000955 ORTHO05D003340 2.0e-13 79.0 66 54.5
Potri.007G042700 Populus trichocarpa HOM05D000955 ORTHO05D003340 2.0e-13 79.0 66 51.5
Actinidia16499 Actinidia chinensis HOM05D000955 ORTHO05D003340 2.6e-13 78.6 66 56.1
COL.COLO4_11400 Corchorus olitorius HOM05D000955 ORTHO05D003340 4.4e-13 77.8 84 46.4
FvH4_1g15920 Fragaria vesca HOM05D000955 ORTHO05D003340 4.4e-13 77.8 66 53.0
FAN28G2528 Fragaria x ananassa HOM05D000955 ORTHO05D003340 4.4e-13 77.8 66 53.0
CiPaw.01G019000 Carya illinoinensis HOM05D000955 ORTHO05D003340 1.3e-12 76.3 68 54.4
FAN23G0571 Fragaria x ananassa HOM05D000955 ORTHO05D003340 1.3e-12 76.3 66 51.5
DCAR_010900 Daucus carota HOM05D000955 ORTHO05D003340 2.9e-12 75.1 82 43.9
TAR625G0252 Trochodendron aralioides HOM05D000283 ORTHO05D003340 2.9e-12 75.1 79 41.8
Aqoxy5G01245 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 4.9e-12 74.3 62 53.2
TAR381G1582 Trochodendron aralioides HOM05D000955 ORTHO05D003340 8.4e-12 73.6 66 50.0
Migut.H00439 Erythranthe guttata HOM05D000955 ORTHO05D003340 1.4e-11 72.8 83 44.6
Lj4C144G12 Lonicera japonica HOM05D002458 ORTHO05D002603 7.1e-11 70.5 66 53.0
MBI02_g02964_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 7.1e-11 70.5 82 41.5
Peaxi162Scf00917g00047 Petunia axillaris HOM05D000955 ORTHO05D003340 1.2e-10 69.7 66 50.0
Nitab4.5_0002263g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.6e-10 69.3 66 51.5
Atru.chr3.343 Acer truncatum HOM05D000955 ORTHO05D003340 4.6e-10 67.8 66 47.0
Peaxi162Scf00917g00031 Petunia axillaris HOM05D000955 ORTHO05D003340 4.6e-10 67.8 66 50.0
Nitab4.5_0000728g0030 Nicotiana tabacum HOM05D000955 ORTHO05D003340 6.0e-10 67.4 66 50.0
Sopen02g015140 Solanum pennellii HOM05D000955 ORTHO05D003340 1.3e-09 66.2 75 42.7
HanXRQChr15g0473701 Helianthus annuus HOM05D000955 ORTHO05D003340 1.7e-09 65.9 66 45.5
Lsat_1_v5_gn_3_90980 Lactuca sativa HOM05D000955 ORTHO05D003340 2.3e-09 65.5 66 42.4
ECA246G2186 Erigeron canadensis HOM05D000955 ORTHO05D003340 3.0e-09 65.1 66 47.0
Solyc02g065010.1 Solanum lycopersicum HOM05D000955 ORTHO05D003340 5.1e-09 64.3 75 41.3
HanXRQChr12g0378981 Helianthus annuus HOM05D000955 ORTHO05D003340 6.6e-09 63.9 66 43.9
Rhsim07G0229000 Rhododendron simsii HOM05D000955 ORTHO05D003340 8.7e-09 63.5 73 38.4
ECA246G1907 Erigeron canadensis HOM05D000955 ORTHO05D003340 1.1e-08 63.2 66 43.9
CAN.G165.19 Capsicum annuum HOM05D000955 ORTHO05D003340 1.5e-08 62.8 75 41.3
HanXRQChr12g0378991 Helianthus annuus HOM05D000955 ORTHO05D003340 1.5e-08 62.8 66 42.4
Rhsim07G0228900 Rhododendron simsii HOM05D000955 ORTHO05D003340 1.5e-08 62.8 61 44.3
Rhsim07G0229300 Rhododendron simsii HOM05D000955 ORTHO05D003340 1.5e-08 62.8 59 45.8
Zm00001eb193710 Zea mays HOM05D000955 ORTHO05D003340 1.5e-08 62.8 65 44.6
Rhsim07G0229400 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.5e-08 62.0 61 42.6
Zm00001eb373190 Zea mays HOM05D000955 ORTHO05D003340 3.3e-08 61.6 68 45.6
MBI02_g02977_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 4.3e-08 61.2 76 40.8
MBI02_g02976_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 7.3e-08 60.5 76 39.5
Rhsim07G0229500 Rhododendron simsii HOM05D000955 ORTHO05D003340 7.3e-08 60.5 59 45.8
PGSC0003DMG400025477 Solanum tuberosum HOM05D000955 ORTHO05D003340 7.3e-08 60.5 75 38.7
Aqoxy5G01246 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.2e-07 59.7 58 48.3
Lsat_1_v5_gn_3_90960 Lactuca sativa HOM05D000955 ORTHO05D003340 2.1e-07 58.9 66 42.4
MBI02_g02973_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 3.6e-07 58.2 66 40.9
MBI02_g02980_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 3.6e-07 58.2 65 38.5
HPP92_004112 Vanilla planifolia HOM05D000955 ORTHO05D003340 3.6e-07 58.2 79 34.2
Os09g0458900 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 6.2e-07 57.4 61 42.6
Aqoxy5G01248 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.4e-06 56.2 58 41.4
Aqoxy6G01348 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.4e-06 56.2 71 38.0
MBI06_g36647_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.4e-06 56.2 61 36.1
Zm00001eb279150 Zea mays HOM05D000955 ORTHO05D003340 1.4e-06 56.2 67 43.3
Lj4C54T13 Lonicera japonica HOM05D000955 ORTHO05D003340 4.0e-06 54.7 73 37.0
Sabra02G0099500 Salix brachista HOM05D000955 ORTHO05D003340 4.0e-06 54.7 61 41.0
MBI02_g02974_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 5.2e-06 54.3 65 41.5
Migut.H00440 Erythranthe guttata HOM05D000955 ORTHO05D003340 6.9e-06 53.9 73 43.8
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 6.9e-06 53.9 61 39.3
CDE08G0020 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 9.0e-06 53.5 66 40.9
COL.COLO4_26487 Corchorus olitorius HOM05D000955 ORTHO05D003340 9.0e-06 53.5 82 32.9
Rhsim07G0229100 Rhododendron simsii HOM05D000955 ORTHO05D003340 9.0e-06 53.5 61 41.0


User provided reference genes

Program Settings