Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 0.0e+00 1357.8 734 100.0
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 3.9e-262 908.3 730 67.8
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.3e-254 883.2 731 67.3
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.1e-253 880.2 732 67.6
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 8.9e-251 870.5 735 66.8
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 8.9e-251 870.5 733 67.3
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.2e-250 870.2 729 63.5
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 1.5e-250 869.8 735 66.5
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 5.4e-248 861.3 731 63.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.2e-247 860.1 731 63.6
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.6e-247 859.8 730 64.9
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 3.5e-247 858.6 729 63.0
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 6.0e-247 857.8 731 63.6
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.0e-246 857.1 733 66.3
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.1e-245 853.6 733 65.1
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.5e-245 853.2 732 66.0
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.5e-245 853.2 732 66.4
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 2.8e-244 849.0 733 64.5
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 3.6e-244 848.6 733 64.5
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 6.2e-244 847.8 729 62.8
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 6.2e-244 847.8 730 63.0
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 8.1e-244 847.4 736 63.2
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.1e-243 847.0 732 65.7
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.8e-243 846.3 732 65.6
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.3e-243 845.9 732 65.6
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.3e-243 845.9 732 65.4
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 4.0e-243 845.1 732 62.4
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.8e-243 844.3 728 62.9
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 6.8e-243 844.3 731 64.3
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.8e-243 844.3 732 65.0
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.2e-242 843.6 732 63.1
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.5e-242 843.2 736 62.9
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 3.2e-240 835.5 734 64.0
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.6e-239 833.2 734 64.7
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.1e-239 832.8 730 64.5
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 3.5e-239 832.0 728 63.3
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 8.6e-238 827.4 746 62.5
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.9e-237 826.2 728 61.3
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 4.3e-237 825.1 730 64.2
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.8e-236 822.4 729 62.6
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 6.2e-236 821.2 734 63.1
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.8e-235 819.7 732 63.0
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 1.2e-234 817.0 734 61.7
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 7.6e-234 814.3 733 63.2
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 8.4e-233 810.8 801 59.7
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.4e-232 809.3 728 63.0
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.3e-230 802.7 728 61.5
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.1e-228 796.2 728 62.1
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.4e-227 793.5 728 61.7
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.5e-226 790.0 739 61.4
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.5e-226 790.0 728 61.5
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.8e-225 785.4 728 61.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 3.8e-225 785.4 733 61.0
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.1e-223 779.6 736 60.9
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 2.7e-223 779.2 726 59.8
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 3.0e-222 775.8 639 66.2
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 3.0e-222 775.8 731 60.3
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 6.6e-222 774.6 734 60.5
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.1e-221 773.9 737 60.5
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 4.3e-221 771.9 734 59.4
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 3.1e-219 765.8 730 60.5
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.9e-216 756.5 737 57.9
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 2.7e-215 752.7 737 57.4
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 7.9e-215 751.1 738 57.5
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.1e-213 747.3 739 58.6
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 1.4e-211 740.3 955 48.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 4.0e-211 738.8 737 56.3
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.5e-210 736.9 731 59.1
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 5.8e-210 734.9 740 58.4
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 1.7e-209 733.4 731 56.5
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.7e-209 733.4 594 66.5
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.2e-209 733.0 723 59.8
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 4.9e-209 731.9 732 59.3
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 9.3e-208 727.6 762 55.2
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.2e-207 727.2 730 58.2
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 4.6e-207 725.3 729 58.8
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 1.0e-206 724.2 731 59.0
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.6e-204 716.8 730 56.8
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 6.2e-204 714.9 737 55.4
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.8e-203 713.4 781 55.2
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.1e-203 712.6 740 57.0
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.0e-202 709.9 733 55.8
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.0e-201 707.6 734 55.0
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.7e-201 706.8 732 54.9
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 2.5e-200 703.0 735 55.0
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 5.5e-200 701.8 734 54.5
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 7.1e-200 701.4 734 56.0
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.0e-198 697.6 737 54.8
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.1e-197 694.1 736 56.9
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 2.5e-197 693.0 941 47.0
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 3.7e-196 689.1 758 52.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 6.9e-195 684.9 717 55.9
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 5.5e-192 675.2 737 54.0
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.8e-190 670.2 757 54.0
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 2.2e-188 663.3 733 54.2
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.1e-187 661.0 626 57.8
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 4.5e-186 655.6 621 57.8
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 4.5e-186 655.6 588 60.7
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.2e-184 649.4 555 64.0
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 6.7e-174 615.1 593 61.0
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 3.8e-169 599.4 538 60.0
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.8e-166 590.5 730 49.6
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 4.0e-166 589.3 598 57.4
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.3e-158 563.5 598 54.0
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 7.8e-138 495.4 526 56.5
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 1.2e-130 471.5 784 40.3
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 9.9e-125 451.8 800 38.6
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 9.6e-112 408.7 726 37.3
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 3.8e-92 343.6 467 47.3
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.2e-90 338.6 306 60.1
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.3e-89 335.1 447 48.5
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.7e-87 327.0 280 62.1
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 1.0e-81 308.9 444 43.2
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 9.4e-59 232.6 311 46.6
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.3e-52 212.2 181 61.9
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 8.5e-52 209.5 188 58.5
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 6.3e-47 193.4 290 42.1
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 1.9e-43 181.8 368 36.4
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 7.2e-43 179.9 162 67.9
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 3.4e-40 171.0 154 57.8
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 3.5e-37 161.0 97 83.5
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.8e-33 148.7 136 71.3
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 6.8e-33 146.7 107 74.8
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 2.6e-32 144.8 137 67.2
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.9e-28 131.0 137 56.9
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.9e-22 112.1 155 46.5
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 4.1e-22 110.9 131 48.9
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.0e-20 104.8 114 48.2
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 4.0e-09 67.8 139 34.5
CBR_g3123 Chara braunii HOM05D003178 ORTHO05D003636 9.2e-06 56.6 171 29.2


User provided reference genes

Program Settings