Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 7.3e-124 447.2 219 100.0
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 7.3e-108 394.0 219 87.7
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 1.6e-102 376.3 219 79.9
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 7.8e-102 374.0 219 80.4
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 2.3e-101 372.5 219 81.7
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 1.5e-100 369.8 219 80.4
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 2.5e-100 369.0 219 80.4
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 4.3e-100 368.2 220 82.7
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 5.6e-100 367.9 219 79.5
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 1.6e-99 366.3 219 79.9
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 1.6e-99 366.3 219 79.9
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 1.6e-99 366.3 219 79.9
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 2.8e-99 365.5 220 79.5
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 4.7e-99 364.8 220 79.1
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 4.4e-97 358.2 220 78.2
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 1.7e-96 356.3 220 78.6
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 2.2e-96 355.9 220 78.6
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 2.2e-96 355.9 220 78.2
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 3.7e-96 355.1 221 78.7
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 3.7e-96 355.1 220 79.1
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 4.9e-96 354.8 220 78.6
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 6.4e-96 354.4 219 76.7
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 1.4e-95 353.2 220 78.2
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 1.9e-95 352.8 221 76.5
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.4e-95 352.4 221 76.5
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 3.2e-95 352.1 221 76.0
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 9.2e-95 350.5 219 76.3
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.2e-94 350.1 221 76.0
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 1.2e-94 350.1 219 74.4
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 2.1e-94 349.4 238 76.1
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 2.1e-94 349.4 220 77.7
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 4.6e-94 348.2 220 77.3
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 6.0e-94 347.8 221 75.6
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 6.0e-94 347.8 220 76.8
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 7.8e-94 347.4 219 76.3
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 7.8e-94 347.4 221 77.8
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 1.0e-93 347.1 220 78.2
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 1.0e-93 347.1 220 79.5
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 1.0e-93 347.1 221 75.6
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.3e-93 346.7 222 75.7
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 2.3e-93 345.9 221 75.1
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 3.9e-93 345.1 220 76.8
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 6.6e-93 344.4 220 77.3
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 8.6e-93 344.0 220 77.3
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 1.1e-92 343.6 220 75.5
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 9.6e-92 340.5 220 74.5
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 9.6e-92 340.5 220 73.6
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 2.8e-91 339.0 220 75.0
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 4.7e-91 338.2 220 74.1
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 6.2e-91 337.8 220 75.5
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 1.8e-90 336.3 220 75.5
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 2.4e-90 335.9 220 74.1
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 1.5e-89 333.2 220 72.7
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 2.0e-89 332.8 220 75.0
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 9.9e-89 330.5 220 72.3
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 3.8e-88 328.6 219 72.1
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 3.8e-88 328.6 219 72.1
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 4.9e-88 328.2 219 70.8
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 6.4e-88 327.8 220 74.1
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 6.4e-88 327.8 219 71.2
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 6.4e-88 327.8 222 72.1
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 1.1e-87 327.0 220 74.5
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 7.1e-87 324.3 219 72.1
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 9.3e-87 323.9 221 71.5
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 2.1e-86 322.8 232 68.5
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 2.7e-86 322.4 220 72.7
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 2.7e-86 322.4 193 79.3
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 3.5e-86 322.0 220 72.7
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 3.5e-86 322.0 196 78.6
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 7.8e-86 320.9 220 73.2
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 5.1e-85 318.2 229 70.7
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 1.1e-84 317.0 221 71.9
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 2.5e-84 315.8 319 53.9
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 2.5e-84 315.8 221 71.5
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.3e-83 313.5 194 77.3
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 6.2e-83 311.2 221 70.6
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 6.2e-83 311.2 199 75.4
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 1.1e-82 310.5 220 67.7
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 1.1e-82 310.5 221 70.6
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 1.1e-82 310.5 221 70.6
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 1.4e-82 310.1 220 68.6
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 1.5e-81 306.6 221 67.4
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 2.6e-81 305.8 300 56.7
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 3.4e-81 305.4 212 72.2
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 5.8e-81 304.7 222 69.8
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 5.8e-81 304.7 222 69.8
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 9.9e-81 303.9 198 75.3
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 2.2e-80 302.8 222 69.8
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 2.9e-80 302.4 193 74.1
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 2.9e-80 302.4 198 73.7
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 3.8e-80 302.0 195 74.4
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 4.9e-80 301.6 210 69.0
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 6.4e-80 301.2 194 75.3
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 8.4e-80 300.8 194 74.2
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 2.4e-79 299.3 221 68.3
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 3.2e-79 298.9 221 68.8
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 4.2e-79 298.5 220 67.7
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 4.2e-79 298.5 220 67.7
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 9.3e-79 297.4 220 67.7
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 1.6e-78 296.6 220 67.7
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 3.0e-77 292.4 220 67.7
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 3.0e-77 292.4 219 66.2
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 5.1e-77 291.6 194 72.7
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 1.1e-76 290.4 194 72.7
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 5.6e-76 288.1 197 72.6
CiPaw.02G011700 Carya illinoinensis HOM05D005053 ORTHO05D006206 1.6e-75 286.6 221 65.6
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 3.6e-75 285.4 289 55.4
Duzib147G0596 Durio zibethinus HOM05D005053 ORTHO05D006206 4.8e-75 285.0 194 72.7
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 2.6e-73 279.3 183 74.3
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 9.9e-73 277.3 209 66.5
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 2.9e-72 275.8 204 65.2
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 3.8e-72 275.4 219 58.4
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 3.8e-72 275.4 213 61.0
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 7.1e-71 271.2 190 66.3
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 1.2e-70 270.4 213 61.0
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 2.3e-69 266.2 221 58.8
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 1.6e-67 260.0 220 58.2
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 1.4e-66 256.9 223 61.4
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 1.4e-66 256.9 223 61.4
Prupe.7G140800 Prunus persica HOM05D005053 ORTHO05D006206 4.0e-66 255.4 162 77.2
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 5.3e-66 255.0 172 71.5
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 5.3e-66 255.0 169 72.8
Psat4g088960 Pisum sativum HOM05D005053 ORTHO05D006206 1.2e-65 253.8 157 79.6
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 3.4e-65 252.3 169 72.8
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 4.5e-65 251.9 218 61.5
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 4.9e-64 248.4 219 55.3
CBR_g23008 Chara braunii HOM05D005053 ORTHO05D006206 2.7e-62 242.7 219 53.0
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 6.0e-62 241.5 195 61.5
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 3.0e-61 239.2 222 54.1
Ah.03g144090 Amaranthus hybridus HOM05D005053 ORTHO05D006206 2.4e-58 229.6 195 61.5
Nitab4.5_0002157g0070 Nicotiana tabacum HOM05D005053 ORTHO05D006206 5.9e-57 224.9 168 63.7
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 2.9e-56 222.6 194 56.2
Psat4g089040 Pisum sativum HOM05D005053 ORTHO05D006206 6.3e-51 204.9 182 59.9
AagrBONN_evm.TU.Sc2ySwM_369.468 Anthoceros agrestis HOM05D000050 ORTHO05D000771 5.9e-49 198.4 219 49.8
Sopen02g035010 Solanum pennellii HOM05D005053 ORTHO05D006206 1.3e-48 197.2 161 58.4
CDE02G0556 Ceratophyllum demersum HOM05D005053 ORTHO05D006206 9.7e-44 181.0 195 49.2
TPR.G40637 Trifolium pratense HOM05D005053 ORTHO05D006206 1.1e-42 177.6 93 88.2
MCO07G250 Micromonas commoda HOM05D005053 ORTHO05D006206 8.8e-37 157.9 221 37.1
Cre07.g334700 Chlamydomonas reinhardtii HOM05D005053 ORTHO05D006206 3.1e-34 149.4 243 36.6
SGA_v2.0_scaffold15G07238 Striga asiatica HOM05D005053 ORTHO05D006206 4.1e-34 149.1 248 39.9
TPR.G672 Trifolium pratense HOM05D005053 ORTHO05D006206 1.7e-32 143.7 99 69.7
FAN19G1388 Fragaria x ananassa HOM05D005053 ORTHO05D006206 5.5e-31 138.7 84 78.6
PRCOL_00006110 Prasinoderma coloniale HOM05D005053 ORTHO05D006206 6.1e-30 135.2 218 37.2
Zm00001eb184160 Zea mays HOM05D005053 ORTHO05D006206 2.0e-28 130.2 84 67.9
Nitab4.5_0003750g0060 Nicotiana tabacum HOM05D005053 ORTHO05D006206 7.2e-23 111.7 140 42.1
AUR62028910 Chenopodium quinoa HOM05D005053 ORTHO05D006206 3.1e-18 96.3 100 50.0
Ciclev10027037m.g Citrus clementina HOM05D005053 ORTHO05D006206 7.0e-18 95.1 85 62.4
CAN.G836.41 Capsicum annuum HOM05D005053 ORTHO05D024763 7.8e-09 65.1 147 34.7
Cfa024505 Carpinus fangiana HOM05D005053 ORTHO05D124968 5.0e-08 62.4 205 24.9


User provided reference genes

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