Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01946 Eucalyptus grandis HOM05D004524 ORTHO05D005477 0.0e+00 1814.3 919 100.0
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 2.8e-153 547.0 867 38.3
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 1.4e-152 544.7 864 39.7
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 1.3e-150 538.1 865 39.0
Dinv26770 Davidia involucrata HOM05D004524 ORTHO05D005477 8.5e-150 535.4 864 38.0
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 4.2e-149 533.1 881 38.8
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 5.2e-147 526.2 866 38.1
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 1.3e-145 521.5 886 36.9
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 4.1e-144 516.5 913 36.7
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 1.6e-143 514.6 864 37.6
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 2.6e-143 513.8 875 36.6
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 7.2e-141 505.8 862 37.4
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 1.6e-140 504.6 862 37.4
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 2.1e-140 504.2 874 36.2
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.6e-140 503.4 862 37.2
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 2.3e-139 500.7 865 37.3
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 7.0e-136 489.2 857 37.0
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 1.2e-135 488.4 878 36.0
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 5.9e-135 486.1 864 36.3
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 1.9e-133 481.1 899 35.0
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 2.2e-129 467.6 872 34.2
Hma1.2p1_0261F.1_g105050 Hydrangea macrophylla HOM05D004524 ORTHO05D005477 8.6e-126 455.7 877 34.3
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 1.2e-124 451.8 867 34.7
Lj7A15G50 Lonicera japonica HOM05D004524 ORTHO05D005477 2.1e-124 451.1 869 34.6
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 6.8e-123 446.0 866 33.9
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 5.2e-115 419.9 859 33.6
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 5.8e-114 416.4 860 31.9
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 3.2e-112 410.6 864 32.6
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 7.8e-111 406.0 867 33.6
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 1.1e-109 402.1 874 32.6
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 9.5e-109 399.1 862 32.4
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 9.5e-109 399.1 863 33.3
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 1.2e-108 398.7 852 32.6
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 1.6e-108 398.3 865 32.0
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 8.0e-108 396.0 922 32.8
Psat0s4301g0040 Pisum sativum HOM05D004524 ORTHO05D005477 1.3e-105 388.7 853 32.1
vmacro17890 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 1.9e-104 384.8 881 30.5
ClCG01G016470 Citrullus lanatus HOM05D004524 ORTHO05D005477 1.2e-103 382.1 843 31.7
arahy.Tifrunner.gnm1.ann1.Z7Z8T5 Arachis hypogaea HOM05D004524 ORTHO05D005477 1.6e-103 381.7 851 31.5
Phvul.003G249100 Phaseolus vulgaris HOM05D004524 ORTHO05D005477 1.6e-103 381.7 862 31.7
Oeu032928.5 Olea europaea HOM05D004524 ORTHO05D005477 1.4e-99 368.6 873 30.4
DCAR_025673 Daucus carota HOM05D004524 ORTHO05D005477 1.2e-98 365.5 875 31.0
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 2.0e-98 364.8 859 30.7
Peaxi162Scf00535g00736 Petunia axillaris HOM05D004524 ORTHO05D005477 2.0e-98 364.8 820 31.1
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 2.6e-98 364.4 905 29.9
CAN.G836.24 Capsicum annuum HOM05D004524 ORTHO05D005477 3.4e-98 364.0 857 30.3
MBI16_g31331_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 7.1e-96 356.3 861 30.9
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 2.7e-95 354.4 809 30.8
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 3.9e-94 350.5 858 30.1
Nitab4.5_0000108g0190 Nicotiana tabacum HOM05D004524 ORTHO05D005477 2.5e-93 347.8 792 30.9
Nitab4.5_0001014g0150 Nicotiana tabacum HOM05D004524 ORTHO05D005477 7.3e-93 346.3 849 29.4
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 9.5e-93 345.9 861 30.4
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 1.8e-91 341.7 875 30.4
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 2.4e-91 341.3 908 29.2
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 2.0e-90 338.2 887 29.3
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 3.4e-90 337.4 866 29.2
PGSC0003DMG400010031 Solanum tuberosum HOM05D004524 ORTHO05D005477 4.4e-90 337.0 829 30.4
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 5.8e-90 336.7 874 29.5
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 1.3e-89 335.5 858 30.2
CARHR159890 Cardamine hirsuta HOM05D004524 ORTHO05D005477 8.4e-89 332.8 889 30.7
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 1.4e-88 332.0 876 28.5
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 7.1e-88 329.7 807 30.5
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 1.3e-86 325.5 929 29.3
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 5.1e-86 323.6 856 30.1
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 5.1e-86 323.6 887 30.0
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 1.5e-85 322.0 885 28.6
Sp5g11790 Schrenkiella parvula HOM05D004524 ORTHO05D005477 1.4e-83 315.5 876 30.5
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 2.4e-83 314.7 869 28.9
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 4.0e-83 313.9 886 29.6
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 4.0e-83 313.9 859 28.8
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 1.2e-82 312.4 879 29.0
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 6.4e-81 306.6 880 29.5
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 6.4e-81 306.6 880 29.5
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 4.2e-80 303.9 883 28.9
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 4.2e-80 303.9 865 29.0
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 9.3e-80 302.8 873 29.0
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 9.3e-80 302.8 873 28.9
Haze_15174 Corylus avellana HOM05D004524 ORTHO05D005477 6.6e-78 296.6 867 30.1
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 4.8e-76 290.4 840 27.6
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 4.0e-75 287.3 747 29.5
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 1.2e-66 259.2 899 26.8
Thecc.01G046200 Theobroma cacao HOM05D004524 ORTHO05D005477 1.8e-62 245.4 513 32.6
Gohir.D11G194900 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.5e-61 242.3 587 29.6
VMungo0251G3212 Vigna mungo HOM05D004524 ORTHO05D005477 4.8e-60 237.3 664 27.9
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 1.3e-54 219.2 905 27.0
Zm00001eb030660 Zea mays HOM05D004524 ORTHO05D005477 1.3e-52 212.6 806 24.9
AUR62027229 Chenopodium quinoa HOM05D004524 ORTHO05D005477 1.6e-52 212.2 698 26.5
Ah.02g126100 Amaranthus hybridus HOM05D004524 ORTHO05D005477 6.1e-47 193.7 762 24.5
HPP92_018739 Vanilla planifolia HOM05D004524 ORTHO05D005477 2.8e-36 158.3 801 23.3
Os12g0594200 Oryza sativa ssp. japonica HOM05D004524 ORTHO05D005477 2.2e-33 148.7 710 22.3
C01p29870 Brassica napus HOM05D004524 ORTHO05D005477 6.1e-31 140.6 567 26.5
Cpa.g.sc15.83 Carica papaya HOM05D004524 ORTHO05D005477 9.1e-27 126.7 178 39.3
arahy.Tifrunner.gnm1.ann1.Y36QTI Arachis hypogaea HOM05D004524 ORTHO05D005477 2.2e-25 122.1 209 32.5
COL.COLO4_22188 Corchorus olitorius HOM05D004524 ORTHO05D005477 1.5e-21 109.4 155 39.4
Glyma.02G062100 Glycine max HOM05D004524 ORTHO05D005477 3.4e-21 108.2 199 32.2
CDE01G0100 Ceratophyllum demersum HOM05D004524 ORTHO05D005477 1.4e-19 102.8 513 22.0
Glyma.02G062000 Glycine max HOM05D004524 ORTHO05D005477 1.7e-17 95.9 241 30.7
SEGI_31558 Sequoiadendron giganteum HOM05D057139 ORTHO05D037600 4.2e-16 91.3 609 22.8
Cpa.g.sc15.82 Carica papaya HOM05D004524 ORTHO05D005477 9.1e-11 73.6 117 35.9
SEGI_01312 Sequoiadendron giganteum HOM05D057139 ORTHO05D037600 5.9e-10 70.9 193 28.5
VMungo0720G0368 Vigna mungo HOM05D004524 ORTHO05D051592 1.6e-07 62.8 79 41.8


User provided reference genes

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