Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.7e-60 235.3 135 100.0
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.4e-45 184.5 131 76.3
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.1e-42 176.8 131 83.2
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.2e-37 158.7 122 72.1
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 9.2e-37 157.1 131 77.9
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.1e-35 151.4 139 64.7
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.1e-33 144.1 130 63.8
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.1e-32 143.7 100 77.0
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.9e-29 132.9 130 59.2
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.2e-29 132.1 90 77.8
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.6e-28 128.3 130 58.5
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.0e-28 127.9 91 74.7
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.3e-26 120.9 83 78.3
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.4e-24 115.9 74 78.4
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 9.9e-23 110.5 88 67.0
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 2.3e-19 99.4 133 44.4
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 5.6e-18 94.7 130 44.6
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 1.6e-17 93.2 133 46.6
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 1.6e-17 93.2 133 46.6
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 3.6e-17 92.0 133 42.9
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 4.8e-17 91.7 133 46.6
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 1.1e-16 90.5 133 43.6
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 2.4e-16 89.4 133 43.6
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 5.3e-16 88.2 130 44.6
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 7.6e-15 84.3 131 42.0
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 9.9e-15 84.0 133 50.4
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 3.8e-14 82.0 135 40.7
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 3.2e-13 79.0 132 42.4
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 1.2e-12 77.0 135 40.0
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 7.9e-12 74.3 131 41.2
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 2.3e-11 72.8 133 42.1
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 3.3e-10 68.9 128 36.7
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 7.4e-10 67.8 133 37.6
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 7.4e-10 67.8 115 36.5
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 1.3e-09 67.0 75 49.3
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 1.3e-09 67.0 75 49.3
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 1.3e-09 67.0 75 49.3
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 1.3e-09 67.0 75 52.0
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 1.3e-09 67.0 133 38.3
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 1.6e-09 66.6 113 41.6
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 2.1e-09 66.2 131 35.1
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 2.1e-09 66.2 134 38.8
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 3.7e-09 65.5 133 45.9
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 6.2e-09 64.7 134 38.8
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 6.2e-09 64.7 134 39.6
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 6.2e-09 64.7 133 36.1
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 6.2e-09 64.7 132 38.6
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 8.2e-09 64.3 129 36.4
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 8.2e-09 64.3 134 37.3
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 8.2e-09 64.3 137 35.8
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 1.1e-08 63.9 138 37.7
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 1.8e-08 63.2 138 37.0
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 1.8e-08 63.2 105 40.0
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 2.4e-08 62.8 131 35.1
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 3.1e-08 62.4 131 37.4
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 3.1e-08 62.4 134 38.8
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 3.1e-08 62.4 113 38.1
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 4.0e-08 62.0 134 37.3
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 9.0e-08 60.8 127 33.9
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 9.0e-08 60.8 126 34.9
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 9.0e-08 60.8 74 43.2
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 1.5e-07 60.1 127 44.9
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 1.5e-07 60.1 74 48.6
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 2.0e-07 59.7 116 37.1
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 2.0e-07 59.7 76 47.4
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 2.6e-07 59.3 132 34.8
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 2.6e-07 59.3 134 35.1
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 3.4e-07 58.9 80 42.5
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 3.4e-07 58.9 75 45.3
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 3.4e-07 58.9 134 36.6
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 4.5e-07 58.5 133 35.3
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 4.5e-07 58.5 126 37.3
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 7.6e-07 57.8 116 36.2
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 1.0e-06 57.4 134 38.1
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 1.3e-06 57.0 138 37.0
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 1.7e-06 56.6 132 34.1
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 2.2e-06 56.2 99 39.4
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 2.9e-06 55.8 100 39.0
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.8e-06 55.5 42 69.0
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 3.8e-06 55.5 130 34.6
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 3.8e-06 55.5 132 34.8
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 6.5e-06 54.7 80 43.8
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 8.4e-06 54.3 84 38.1


User provided reference genes

Program Settings