Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.7e-146 521.2 262 100.0
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.1e-116 421.4 275 80.0
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.0e-108 395.6 259 80.3
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.3e-107 392.1 259 79.9
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.4e-105 386.0 276 76.4
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.4e-103 377.5 259 76.8
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.2e-98 362.8 241 79.3
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.0e-91 339.7 259 70.7
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.5e-88 328.6 200 83.0
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.3e-83 312.4 259 67.6
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 1.0e-76 290.8 250 59.6
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 6.3e-74 281.6 255 56.5
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 7.7e-72 274.6 256 57.4
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 1.0e-71 274.2 260 56.2
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.8e-71 272.3 195 75.4
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 6.5e-71 271.6 259 57.1
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 8.5e-71 271.2 256 56.6
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 1.5e-70 270.4 256 56.6
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 9.4e-70 267.7 279 52.3
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 2.1e-69 266.5 256 55.9
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.1e-69 266.5 192 76.0
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 8.0e-69 264.6 256 55.5
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.0e-68 262.3 191 76.4
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 5.2e-68 261.9 257 54.5
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.6e-67 259.6 193 73.6
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 6.3e-66 255.0 276 52.2
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.4e-65 253.8 211 68.2
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 1.8e-65 253.4 257 53.3
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 1.8e-65 253.4 257 53.3
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 2.4e-65 253.1 263 53.6
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 3.1e-65 252.7 258 53.5
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 4.1e-65 252.3 255 54.1
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 4.1e-65 252.3 259 55.2
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 4.5e-64 248.8 259 54.4
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 7.7e-64 248.1 260 53.5
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 1.0e-63 247.7 257 53.3
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 1.0e-63 247.7 256 53.1
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 1.7e-63 246.9 259 54.1
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 2.2e-63 246.5 257 51.8
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 1.1e-62 244.2 259 53.7
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 2.5e-62 243.0 256 51.2
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 7.2e-62 241.5 259 53.7
vmacro17962 Vaccinium macrocarpon HOM05D006446 ORTHO05D007832 1.2e-61 240.7 264 53.4
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 3.6e-61 239.2 256 50.4
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 3.6e-61 239.2 256 54.3
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 1.4e-60 237.3 261 50.6
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 1.8e-60 236.9 256 52.7
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 3.0e-60 236.1 251 53.4
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 3.0e-60 236.1 258 51.2
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 5.2e-60 235.3 256 52.3
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 5.2e-60 235.3 256 52.0
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 5.2e-60 235.3 263 49.4
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 6.8e-60 235.0 254 52.8
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 3.4e-59 232.6 256 51.2
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 3.4e-59 232.6 259 51.0
Nitab4.5_0001169g0030 Nicotiana tabacum HOM05D006446 ORTHO05D007832 3.4e-59 232.6 260 53.1
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 7.5e-59 231.5 260 51.9
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 9.8e-59 231.1 250 53.2
DCAR_010875 Daucus carota HOM05D006446 ORTHO05D007832 9.8e-59 231.1 257 51.4
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 2.8e-58 229.6 257 50.6
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 3.7e-58 229.2 257 51.0
Lj4A152T18 Lonicera japonica HOM05D006446 ORTHO05D007832 4.8e-58 228.8 270 49.6
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 6.3e-58 228.4 256 50.8
HanXRQChr15g0490771 Helianthus annuus HOM05D006446 ORTHO05D007832 6.3e-58 228.4 260 50.8
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 1.1e-57 227.6 258 50.0
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 1.1e-57 227.6 253 51.8
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 1.4e-57 227.3 250 52.0
Solyc03g044370.3 Solanum lycopersicum HOM05D006446 ORTHO05D007832 2.4e-57 226.5 256 50.4
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 3.1e-57 226.1 259 50.6
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 3.1e-57 226.1 257 51.0
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 5.4e-57 225.3 265 49.1
Oeu017452.1 Olea europaea HOM05D006446 ORTHO05D007832 7.0e-57 224.9 266 49.2
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 7.0e-57 224.9 254 50.8
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 1.2e-56 224.2 256 50.4
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 2.7e-56 223.0 257 50.6
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 3.5e-56 222.6 254 51.2
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 5.9e-56 221.9 258 49.2
Potri.005G140500 Populus trichocarpa HOM05D006446 ORTHO05D007832 1.0e-55 221.1 227 53.7
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 5.0e-55 218.8 257 47.9
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 6.6e-55 218.4 253 51.0
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 1.1e-54 217.6 311 43.7
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 3.3e-54 216.1 256 48.8
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 2.1e-53 213.4 259 47.5
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 1.4e-52 210.7 257 48.2
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 1.4e-52 210.7 258 50.4
SGA_v2.0_scaffold143G35805 Striga asiatica HOM05D006446 ORTHO05D007832 4.0e-52 209.1 255 48.2
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 9.8e-51 204.5 284 44.7
Ah.03g145380 Amaranthus hybridus HOM05D006446 ORTHO05D007832 1.3e-50 204.1 286 43.4
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 7.0e-49 198.4 284 43.7
Eucgr.H02090 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.6e-48 197.2 174 64.9
HPP92_014795 Vanilla planifolia HOM05D006446 ORTHO05D007832 1.6e-48 197.2 264 44.7
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 1.3e-47 194.1 190 55.3
Haze_15372 Corylus avellana HOM05D006446 ORTHO05D007832 5.0e-47 192.2 185 55.1
PGSC0003DMG402034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 2.8e-45 186.4 187 54.0
CDE01G0083 Ceratophyllum demersum HOM05D006446 ORTHO05D007832 3.1e-44 183.0 257 43.2
EL10Ac6g15719 Beta vulgaris HOM05D006446 ORTHO05D007832 2.6e-43 179.9 239 46.9
Hund16350 Selenicereus undatus HOM05D006446 ORTHO05D007832 1.4e-41 174.1 248 42.7
Zm00001eb066800 Zea mays HOM05D006446 ORTHO05D007832 5.0e-39 165.6 247 42.5
AUR62003910 Chenopodium quinoa HOM05D006446 ORTHO05D007832 1.1e-38 164.5 241 41.1
PSO170G5547 Papaver somniferum HOM05D006446 ORTHO05D007832 3.3e-38 162.9 244 43.0
Pp3c2_9710 Physcomitrium patens HOM05D006446 ORTHO05D007832 4.3e-38 162.5 253 39.1
AagrBONN_evm.TU.Sc2ySwM_368.596 Anthoceros agrestis HOM05D006446 ORTHO05D007832 4.4e-35 152.5 272 37.9
PSO210G7690 Papaver somniferum HOM05D006446 ORTHO05D007832 5.8e-35 152.1 227 42.7
Mapoly0012s0095 Marchantia polymorpha HOM05D006446 ORTHO05D007832 7.5e-35 151.8 266 37.2
Pp3c17_8570 Physcomitrium patens HOM05D006446 ORTHO05D007832 3.0e-31 139.8 261 35.2
AUR62001902 Chenopodium quinoa HOM05D006446 ORTHO05D007832 3.6e-29 132.9 152 48.0
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 4.7e-29 132.5 257 36.6
Eucgr.H01699 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.9e-28 128.3 79 84.8
Os04g0670400 Oryza sativa ssp. japonica HOM05D006446 ORTHO05D007832 1.0e-23 114.8 107 54.2
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.3e-23 113.6 88 67.0
SEGI_14722 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 4.0e-20 102.8 197 36.0
Cre05.g246050 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 6.2e-13 79.0 161 32.3
Cre09.g408825 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 6.2e-13 79.0 161 32.3
SEGI_09227 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 9.9e-11 71.6 106 42.5
MCO10G335 Micromonas commoda HOM05D006446 ORTHO05D007832 2.2e-10 70.5 169 31.4
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 8.7e-07 58.5 83 37.3
Oeu014821.1 Olea europaea HOM05D006446 ORTHO05D007832 4.3e-06 56.2 71 45.1
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 5.6e-06 55.8 64 45.3


User provided reference genes

Program Settings