Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.9e-150 533.9 295 100.0
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.3e-131 473.4 304 81.6
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.2e-131 470.7 313 83.1
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.0e-124 449.5 272 84.9
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.9e-121 438.0 284 81.0
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.5e-119 433.3 264 85.2
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.3e-115 417.5 267 82.0
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.2e-110 403.7 313 70.6
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.3e-91 337.8 259 70.7
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 4.6e-89 332.0 317 57.4
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 3.0e-88 329.3 315 55.9
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 1.1e-87 327.4 315 57.1
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 7.3e-87 324.7 315 56.8
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 4.7e-86 322.0 315 56.2
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 8.1e-86 321.2 315 56.2
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 1.8e-85 320.1 299 59.5
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 2.6e-84 316.2 314 55.1
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 4.4e-84 315.5 319 59.2
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 1.7e-83 313.5 315 54.0
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 2.4e-82 309.7 315 55.2
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.2e-82 308.9 303 59.7
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 4.2e-82 308.9 339 51.6
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 1.2e-81 307.4 313 54.0
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 2.7e-81 306.2 329 52.9
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 7.8e-81 304.7 314 52.5
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 3.0e-80 302.8 315 54.3
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 7.3e-79 298.1 316 54.1
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 1.2e-78 297.4 316 52.8
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 1.1e-77 294.3 315 53.7
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 3.1e-77 292.7 315 56.8
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.3e-77 292.0 244 68.0
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 2.6e-76 289.7 318 52.2
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 2.9e-75 286.2 316 52.2
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 8.4e-75 284.6 314 52.9
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 8.4e-75 284.6 322 51.2
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 8.4e-75 284.6 314 50.3
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 2.4e-74 283.1 314 52.5
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.4e-74 283.1 258 64.3
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 7.1e-74 281.6 314 52.9
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 3.5e-73 279.3 314 52.5
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 4.6e-73 278.9 314 52.2
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 4.6e-73 278.9 317 52.7
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 6.0e-73 278.5 314 51.9
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 1.3e-72 277.3 319 50.8
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 5.1e-72 275.4 308 50.6
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 5.1e-72 275.4 274 54.7
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 2.5e-71 273.1 314 51.6
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 2.5e-71 273.1 314 50.3
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.6e-71 271.9 259 62.9
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 8.1e-70 268.1 315 50.5
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 8.1e-70 268.1 282 53.9
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 1.1e-69 267.7 313 50.2
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 1.8e-69 266.9 316 48.7
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 2.4e-69 266.5 282 53.5
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 5.3e-69 265.4 314 49.7
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 9.0e-69 264.6 313 48.9
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 9.0e-69 264.6 235 66.0
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 2.0e-68 263.5 317 49.5
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 3.4e-68 262.7 315 50.5
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 3.4e-68 262.7 315 49.5
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 5.8e-68 261.9 313 48.2
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 4.9e-67 258.8 316 49.7
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 6.4e-67 258.5 314 49.4
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 8.4e-67 258.1 315 48.3
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 2.4e-66 256.5 320 47.2
Oeu017452.1 Olea europaea HOM05D006446 ORTHO05D007832 2.4e-66 256.5 280 50.7
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 9.3e-66 254.6 268 51.9
Lj4A152T18 Lonicera japonica HOM05D006446 ORTHO05D007832 1.6e-65 253.8 281 51.2
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 3.5e-65 252.7 315 48.6
Potri.005G140500 Populus trichocarpa HOM05D006446 ORTHO05D007832 3.5e-65 252.7 241 56.8
Nitab4.5_0001169g0030 Nicotiana tabacum HOM05D006446 ORTHO05D007832 4.6e-65 252.3 314 48.4
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 4.6e-65 252.3 313 48.9
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 6.0e-65 251.9 314 45.5
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 1.3e-64 250.8 317 47.0
DCAR_010875 Daucus carota HOM05D006446 ORTHO05D007832 1.8e-64 250.4 269 52.0
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 1.5e-63 247.3 276 50.4
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 1.6e-62 243.8 312 47.8
Solyc03g044370.3 Solanum lycopersicum HOM05D006446 ORTHO05D007832 3.7e-62 242.7 265 51.3
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 8.1e-62 241.5 316 46.8
HanXRQChr15g0490771 Helianthus annuus HOM05D006446 ORTHO05D007832 4.0e-61 239.2 273 50.2
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 5.3e-61 238.8 336 45.5
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 5.8e-60 235.3 360 41.9
vmacro17962 Vaccinium macrocarpon HOM05D006446 ORTHO05D007832 9.9e-60 234.6 331 45.6
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.3e-59 234.2 204 67.2
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 1.7e-59 233.8 336 45.2
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 6.4e-59 231.9 315 47.9
Ah.03g145380 Amaranthus hybridus HOM05D006446 ORTHO05D007832 7.1e-58 228.4 297 45.5
Eucgr.H02090 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.1e-58 228.4 180 67.2
Haze_15372 Corylus avellana HOM05D006446 ORTHO05D007832 4.6e-57 225.7 313 44.7
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 1.1e-55 221.1 323 42.4
HPP92_014795 Vanilla planifolia HOM05D006446 ORTHO05D007832 4.3e-55 219.2 313 43.5
EL10Ac6g15719 Beta vulgaris HOM05D006446 ORTHO05D007832 2.8e-54 216.5 244 50.8
CDE01G0083 Ceratophyllum demersum HOM05D006446 ORTHO05D007832 6.9e-53 211.8 282 45.7
PGSC0003DMG402034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 1.1e-50 204.5 180 56.7
Hund16350 Selenicereus undatus HOM05D006446 ORTHO05D007832 7.1e-50 201.8 296 43.2
PSO170G5547 Papaver somniferum HOM05D006446 ORTHO05D007832 8.7e-48 194.9 314 40.4
SGA_v2.0_scaffold143G35805 Striga asiatica HOM05D006446 ORTHO05D007832 9.7e-47 191.4 266 45.5
AUR62003910 Chenopodium quinoa HOM05D006446 ORTHO05D007832 1.1e-45 188.0 247 45.7
Mapoly0012s0095 Marchantia polymorpha HOM05D006446 ORTHO05D007832 1.0e-43 181.4 277 42.2
AagrBONN_evm.TU.Sc2ySwM_368.596 Anthoceros agrestis HOM05D006446 ORTHO05D007832 3.8e-43 179.5 280 39.3
Zm00001eb066800 Zea mays HOM05D006446 ORTHO05D007832 5.0e-43 179.1 259 43.6
Pp3c2_9710 Physcomitrium patens HOM05D006446 ORTHO05D007832 1.4e-42 177.6 266 40.6
PSO210G7690 Papaver somniferum HOM05D006446 ORTHO05D007832 9.4e-42 174.9 240 43.3
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.7e-41 173.3 131 83.2
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 3.9e-40 169.5 298 39.9
Pp3c17_8570 Physcomitrium patens HOM05D006446 ORTHO05D007832 3.1e-37 159.8 277 37.5
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 4.1e-37 159.5 232 50.0
AUR62001902 Chenopodium quinoa HOM05D006446 ORTHO05D007832 5.9e-36 155.6 158 51.3
Os04g0670400 Oryza sativa ssp. japonica HOM05D006446 ORTHO05D007832 1.0e-27 128.3 120 54.2
Eucgr.H01699 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.4e-23 112.8 68 83.8
MCO10G335 Micromonas commoda HOM05D006446 ORTHO05D007832 1.0e-19 101.7 90 48.9
SEGI_09227 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 2.1e-17 94.0 134 39.6
Cre05.g246050 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 2.3e-16 90.5 177 32.8
Cre09.g408825 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 2.3e-16 90.5 177 32.8
SEGI_14722 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 2.0e-12 77.4 238 30.7
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 4.2e-10 69.7 99 44.4
Oeu014821.1 Olea europaea HOM05D006446 ORTHO05D007832 4.8e-06 56.2 74 41.9


User provided reference genes

Program Settings