Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.0e-179 631.7 318 100.0
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.5e-165 585.5 340 89.1
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.6e-164 582.8 340 89.1
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.2e-159 566.6 319 92.2
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.6e-159 566.2 340 86.8
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.3e-133 477.6 333 76.3
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.5e-125 452.6 241 95.9
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.2e-120 435.6 301 78.1
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.0e-119 431.4 264 85.2
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 2.3e-110 402.9 337 62.0
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 8.1e-108 394.4 338 62.7
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.1e-107 392.5 321 70.4
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.0e-106 389.8 259 79.9
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 4.4e-106 388.7 339 61.4
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 4.4e-106 388.7 337 62.0
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 1.3e-105 387.1 358 60.1
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 1.7e-105 386.7 360 58.6
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.2e-104 382.1 321 62.9
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 1.2e-103 380.6 337 59.9
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 4.6e-103 378.6 338 59.8
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 1.3e-102 377.1 337 60.5
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 8.7e-102 374.4 339 59.6
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 1.5e-101 373.6 337 59.9
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 4.3e-101 372.1 337 60.8
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 6.2e-100 368.2 338 58.0
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 8.1e-100 367.9 341 59.8
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 1.4e-99 367.1 340 59.1
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 2.4e-99 366.3 341 58.1
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 7.6e-98 361.3 337 59.1
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 9.9e-98 360.9 343 58.3
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 1.3e-97 360.5 331 59.2
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 1.7e-97 360.1 343 58.3
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 3.8e-97 359.0 343 58.3
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 1.9e-96 356.7 341 56.3
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 5.4e-96 355.1 338 55.6
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 7.1e-96 354.8 338 58.0
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 7.1e-96 354.8 338 58.6
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 9.3e-96 354.4 340 58.5
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 2.1e-95 353.2 339 58.4
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 4.6e-95 352.1 338 57.4
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 4.6e-95 352.1 262 67.6
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 4.6e-95 352.1 317 59.3
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 1.3e-94 350.5 332 59.0
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 3.0e-94 349.4 345 56.8
Potri.005G140500 Populus trichocarpa HOM05D006446 ORTHO05D007832 1.5e-93 347.1 311 60.1
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.9e-93 346.7 322 64.9
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 1.9e-93 346.7 340 56.5
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 3.3e-93 345.9 338 57.1
DCAR_010875 Daucus carota HOM05D006446 ORTHO05D007832 3.3e-93 345.9 341 56.6
Solyc03g044370.3 Solanum lycopersicum HOM05D006446 ORTHO05D007832 3.3e-93 345.9 334 55.7
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 9.6e-93 344.4 330 57.0
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 9.6e-93 344.4 340 56.5
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 1.3e-92 344.0 334 55.7
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 2.1e-92 343.2 317 58.0
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 1.1e-91 340.9 323 57.3
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 1.8e-91 340.1 327 56.9
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 5.3e-91 338.6 337 55.8
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 5.3e-91 338.6 330 55.8
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 1.2e-90 337.4 338 56.2
Nitab4.5_0001169g0030 Nicotiana tabacum HOM05D006446 ORTHO05D007832 2.6e-90 336.3 323 57.3
Lj4A152T18 Lonicera japonica HOM05D006446 ORTHO05D007832 5.8e-90 335.1 337 55.8
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 7.6e-90 334.7 344 54.9
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 1.3e-89 334.0 320 56.9
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 2.9e-89 332.8 336 56.0
Oeu017452.1 Olea europaea HOM05D006446 ORTHO05D007832 6.4e-89 331.6 345 53.9
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 1.9e-88 330.1 337 55.2
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 3.2e-88 329.3 338 53.6
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 5.5e-88 328.6 339 54.3
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 1.6e-87 327.0 265 63.8
HanXRQChr15g0490771 Helianthus annuus HOM05D006446 ORTHO05D007832 3.0e-86 322.8 339 53.1
Eucgr.H02090 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.5e-85 319.7 269 66.2
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 2.5e-85 319.7 317 57.1
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 9.6e-85 317.8 260 62.7
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 1.6e-84 317.0 341 54.0
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 1.1e-83 314.3 317 55.2
Haze_15372 Corylus avellana HOM05D006446 ORTHO05D007832 2.4e-83 313.2 250 64.0
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 1.2e-82 310.8 401 47.1
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 4.5e-82 308.9 330 52.1
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.8e-81 305.8 214 78.5
CDE01G0083 Ceratophyllum demersum HOM05D006446 ORTHO05D007832 4.9e-81 305.4 341 52.2
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 8.4e-81 304.7 344 55.5
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 1.9e-80 303.5 368 48.6
EL10Ac6g15719 Beta vulgaris HOM05D006446 ORTHO05D007832 7.1e-80 301.6 317 53.9
PGSC0003DMG402034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 1.6e-79 300.4 269 58.4
Ah.03g145380 Amaranthus hybridus HOM05D006446 ORTHO05D007832 3.5e-79 299.3 350 49.1
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 2.3e-78 296.6 326 50.6
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.4e-77 291.6 215 76.3
HPP92_014795 Vanilla planifolia HOM05D006446 ORTHO05D007832 2.8e-76 289.7 342 49.4
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 1.1e-75 287.7 254 59.1
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 5.3e-75 285.4 254 59.1
vmacro17962 Vaccinium macrocarpon HOM05D006446 ORTHO05D007832 2.9e-73 279.6 259 60.6
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.2e-72 275.8 191 80.1
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 1.0e-70 271.2 343 48.4
SGA_v2.0_scaffold143G35805 Striga asiatica HOM05D006446 ORTHO05D007832 4.8e-68 262.3 349 48.4
PSO170G5547 Papaver somniferum HOM05D006446 ORTHO05D007832 1.4e-67 260.8 324 48.1
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 3.1e-67 259.6 287 51.2
PSO210G7690 Papaver somniferum HOM05D006446 ORTHO05D007832 1.9e-64 250.4 302 48.3
Zm00001eb066800 Zea mays HOM05D006446 ORTHO05D007832 4.2e-64 249.2 335 46.9
Hund16350 Selenicereus undatus HOM05D006446 ORTHO05D007832 6.1e-63 245.4 340 45.6
AagrBONN_evm.TU.Sc2ySwM_368.596 Anthoceros agrestis HOM05D006446 ORTHO05D007832 2.6e-61 240.0 335 42.1
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 8.2e-60 235.0 320 46.2
Mapoly0012s0095 Marchantia polymorpha HOM05D006446 ORTHO05D007832 3.5e-58 229.6 340 42.1
Pp3c2_9710 Physcomitrium patens HOM05D006446 ORTHO05D007832 5.0e-57 225.7 321 42.4
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 5.0e-57 225.7 327 45.0
AUR62003910 Chenopodium quinoa HOM05D006446 ORTHO05D007832 6.1e-55 218.8 335 42.1
Pp3c17_8570 Physcomitrium patens HOM05D006446 ORTHO05D007832 3.5e-50 203.0 326 38.3
Os04g0670400 Oryza sativa ssp. japonica HOM05D006446 ORTHO05D007832 1.5e-48 197.6 183 56.3
AUR62001902 Chenopodium quinoa HOM05D006446 ORTHO05D007832 3.1e-43 179.9 229 45.9
Eucgr.H01699 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.8e-27 127.5 81 84.0
Cre05.g246050 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 4.1e-27 126.3 260 33.1
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.9e-25 120.2 83 78.3
MCO10G335 Micromonas commoda HOM05D006446 ORTHO05D007832 2.9e-25 120.2 250 34.0
Cre09.g408825 Chlamydomonas reinhardtii HOM05D006446 ORTHO05D007832 5.2e-22 109.4 177 36.2
SEGI_14722 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 1.5e-21 107.8 196 39.8
SEGI_09227 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 7.8e-18 95.5 112 44.6
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 1.9e-16 90.9 243 28.4
PGSC0003DMG400000946 Solanum tuberosum HOM05D006446 ORTHO05D007832 2.5e-08 63.9 46 71.7
CDE01G0006 Ceratophyllum demersum HOM05D001005 ORTHO05D000836 9.5e-08 62.0 171 27.5
PRCOL_00000140 Prasinoderma coloniale HOM05D005315 ORTHO05D007832 1.2e-07 61.6 171 30.4
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 4.7e-07 59.7 42 66.7
PGR044G2036 Punica granatum HOM05D005315 ORTHO05D006589 6.2e-07 59.3 161 29.8
Oeu014821.1 Olea europaea HOM05D006446 ORTHO05D007832 8.1e-07 58.9 71 47.9
Gohir.D05G295300 Gossypium hirsutum HOM05D001005 ORTHO05D000836 1.4e-06 58.2 160 28.1
Carub.0006s0320 Capsella rubella HOM05D001005 ORTHO05D000836 1.8e-06 57.8 138 29.7
Eucgr.J00903 Eucalyptus grandis HOM05D001005 ORTHO05D000836 2.3e-06 57.4 133 30.1
Gohir.A05G294700 Gossypium hirsutum HOM05D001005 ORTHO05D000836 2.3e-06 57.4 160 27.5
PSO210G5824 Papaver somniferum HOM05D005315 ORTHO05D006589 3.1e-06 57.0 170 27.6
BcaB01g05774 Brassica carinata HOM05D001005 ORTHO05D000836 4.0e-06 56.6 138 29.0
CANSAT25G3366 Cannabis sativa HOM05D005315 ORTHO05D006589 5.2e-06 56.2 161 26.1
BcaC06g32128 Brassica carinata HOM05D001005 ORTHO05D000836 6.8e-06 55.8 138 27.5
C09p72620 Brassica napus HOM05D001005 ORTHO05D000836 6.8e-06 55.8 138 27.5
BolC8t51348H Brassica oleracea HOM05D005315 ORTHO05D006589 6.8e-06 55.8 156 25.6
BolC9t60002H Brassica oleracea HOM05D001005 ORTHO05D000836 6.8e-06 55.8 138 27.5


User provided reference genes

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