Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 9.2e-62 240.0 114 100.0
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.6e-56 221.9 138 81.2
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.9e-46 189.1 139 66.2
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 9.2e-46 186.8 138 66.7
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.6e-45 186.0 138 65.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 3.5e-45 184.9 138 65.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.5e-45 184.9 138 66.7
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.3e-43 178.3 135 62.2
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 7.3e-43 177.2 136 63.2
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 9.5e-43 176.8 139 62.6
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.6e-42 174.9 141 60.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 4.7e-42 174.5 138 61.6
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 6.2e-42 174.1 134 63.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.8e-41 172.6 140 59.3
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.1e-41 171.8 135 60.7
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.0e-41 171.4 131 63.4
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 5.2e-41 171.0 135 60.0
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.2e-41 171.0 135 60.0
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.2e-41 171.0 135 60.0
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 6.8e-41 170.6 136 62.5
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.2e-40 169.9 136 58.8
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.2e-40 169.9 136 59.6
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.5e-40 169.5 141 58.9
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.5e-40 169.5 138 58.7
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.6e-40 168.7 136 60.3
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.6e-40 168.7 136 59.6
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.4e-40 167.9 136 58.8
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.4e-40 167.9 136 58.1
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.5e-40 167.2 136 59.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.5e-40 167.2 136 57.4
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 7.5e-40 167.2 136 60.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.3e-39 166.4 138 60.9
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.7e-39 166.0 136 59.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.2e-39 165.6 136 59.6
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.9e-39 165.2 124 61.3
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.9e-39 165.2 138 58.0
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 3.7e-39 164.9 135 60.0
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.7e-39 164.9 138 59.4
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 6.4e-39 164.1 135 57.8
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 8.3e-39 163.7 132 60.6
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.4e-38 162.9 135 59.3
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.4e-38 162.2 136 55.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.4e-38 162.2 137 57.7
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 4.1e-38 161.4 138 55.1
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 5.4e-38 161.0 137 55.5
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 7.1e-38 160.6 134 55.2
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 9.2e-38 160.2 136 55.9
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 9.2e-38 160.2 133 55.6
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 9.2e-38 160.2 135 59.3
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 9.2e-38 160.2 138 55.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.6e-37 159.5 138 56.5
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.6e-37 159.5 138 54.3
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.1e-37 159.1 135 56.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.1e-37 159.1 135 56.3
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 2.1e-37 159.1 138 55.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 2.7e-37 158.7 138 56.5
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.7e-37 158.7 139 57.6
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 3.5e-37 158.3 138 58.0
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 3.5e-37 158.3 133 54.9
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 4.6e-37 157.9 141 54.6
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 4.6e-37 157.9 136 56.6
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 4.6e-37 157.9 135 58.5
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 7.8e-37 157.1 137 55.5
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 7.8e-37 157.1 137 55.5
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.0e-36 156.8 136 57.4
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.0e-36 156.8 136 58.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.3e-36 156.4 136 55.1
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.7e-36 156.0 134 56.7
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 3.9e-36 154.8 135 55.6
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 3.9e-36 154.8 136 54.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 6.6e-36 154.1 134 55.2
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 6.6e-36 154.1 136 53.7
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 8.6e-36 153.7 130 55.4
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 8.6e-36 153.7 137 55.5
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.1e-35 153.3 137 54.0
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 1.1e-35 153.3 137 54.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.1e-35 153.3 136 56.6
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.1e-35 153.3 134 55.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.5e-35 152.9 134 56.0
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.9e-35 152.5 136 54.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.9e-35 152.5 136 54.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.9e-35 152.5 136 55.9
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.9e-35 152.5 86 77.9
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.5e-35 152.1 137 54.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 5.6e-35 151.0 136 53.7
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 5.6e-35 151.0 133 55.6
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 7.3e-35 150.6 136 53.7
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.2e-34 149.8 135 51.1
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 2.1e-34 149.1 137 53.3
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.6e-34 148.3 119 60.5
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 3.6e-34 148.3 134 53.7
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.6e-34 148.3 142 52.1
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 6.2e-34 147.5 132 53.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 8.1e-34 147.1 119 59.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.1e-33 146.7 139 51.8
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 8.9e-33 143.7 127 55.1
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 8.9e-33 143.7 127 55.1
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.2e-32 143.3 132 53.0
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 5.8e-32 141.0 86 74.4
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.2e-31 139.0 128 54.7
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 4.9e-31 137.9 135 48.9
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 6.4e-31 137.5 88 69.3
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 6.4e-31 137.5 140 47.9
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 3.2e-30 135.2 119 52.9
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 3.2e-30 135.2 136 47.8
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 4.1e-30 134.8 88 68.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 7.1e-30 134.0 119 52.9
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.1e-29 132.5 124 54.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.1e-29 132.5 124 54.8
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 4.6e-29 131.3 86 66.3
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.6e-29 131.3 78 73.1
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 6.0e-29 131.0 124 54.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 7.8e-29 130.6 138 48.6
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 3.3e-27 125.2 125 51.2
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.2e-26 123.2 85 63.5
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 6.2e-26 120.9 116 50.0
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 2.6e-24 115.5 129 43.4
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 4.4e-24 114.8 131 45.8
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.9e-23 112.1 129 38.0
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 6.4e-23 110.9 119 42.9
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 8.4e-23 110.5 116 43.1
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.2e-22 108.2 89 58.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.2e-22 108.2 116 40.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 5.4e-22 107.8 123 40.7
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 3.9e-20 101.7 109 47.7
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.1e-18 95.9 95 50.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 6.2e-18 94.4 91 51.6
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.8e-17 92.8 117 39.3
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.2e-13 80.1 86 46.5
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.0e-13 77.8 72 51.4


User provided reference genes

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