Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.6e-111 406.0 195 100.0
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 3.5e-61 238.8 141 80.1
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 5.0e-60 235.0 142 75.4
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 6.6e-60 234.6 142 76.8
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 8.6e-60 234.2 144 76.4
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 3.3e-59 232.3 152 69.7
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 5.6e-59 231.5 141 76.6
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.6e-58 229.9 141 74.5
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 2.8e-58 229.2 141 75.2
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 3.6e-58 228.8 141 73.8
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 3.6e-58 228.8 141 73.0
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 6.2e-58 228.0 141 74.5
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 1.4e-57 226.9 144 74.3
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.4e-57 226.9 141 74.5
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 1.8e-57 226.5 141 74.5
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.3e-57 226.1 141 74.5
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 5.2e-57 224.9 141 77.3
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 5.2e-57 224.9 141 75.2
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 6.8e-57 224.6 144 72.9
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 6.8e-57 224.6 141 73.8
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 1.2e-56 223.8 141 73.0
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.2e-56 223.8 142 75.4
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 1.2e-56 223.8 141 72.3
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 1.5e-56 223.4 183 59.6
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 2.6e-56 222.6 141 75.2
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 3.4e-56 222.2 141 73.0
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 3.4e-56 222.2 141 74.5
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 5.8e-56 221.5 141 73.8
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 5.8e-56 221.5 183 59.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 7.5e-56 221.1 141 73.0
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 7.5e-56 221.1 141 73.8
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 9.8e-56 220.7 123 80.5
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 9.8e-56 220.7 148 67.6
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 1.3e-55 220.3 141 72.3
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 1.3e-55 220.3 138 76.1
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 1.3e-55 220.3 142 71.8
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 1.3e-55 220.3 141 74.5
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.7e-55 219.9 141 73.0
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.7e-55 219.9 141 71.6
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 2.2e-55 219.5 141 73.0
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 3.7e-55 218.8 141 70.2
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 3.7e-55 218.8 141 70.2
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 4.9e-55 218.4 141 75.2
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 4.9e-55 218.4 151 69.5
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 4.9e-55 218.4 142 71.1
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 6.4e-55 218.0 141 70.9
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 8.3e-55 217.6 141 70.2
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 8.3e-55 217.6 141 72.3
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 1.1e-54 217.2 141 68.8
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 4.1e-54 215.3 141 68.8
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 4.1e-54 215.3 141 68.8
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 5.4e-54 214.9 141 68.8
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 7.0e-54 214.5 141 68.1
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 7.0e-54 214.5 141 70.2
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 9.2e-54 214.2 141 68.1
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 9.2e-54 214.2 147 70.7
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 2.0e-53 213.0 141 70.2
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 2.0e-53 213.0 141 70.2
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 2.7e-53 212.6 123 80.5
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 3.5e-53 212.2 141 70.9
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 3.5e-53 212.2 141 70.9
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 4.6e-53 211.8 141 69.5
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 7.8e-53 211.1 145 71.0
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 2.3e-52 209.5 141 66.0
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.0e-52 209.1 141 65.2
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 3.9e-52 208.8 141 66.0
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 6.6e-52 208.0 141 66.7
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 8.6e-52 207.6 141 65.2
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.1e-51 207.2 141 66.7
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.1e-51 207.2 124 79.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 7.3e-51 204.5 178 56.2
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.6e-50 203.4 141 66.0
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 2.1e-50 203.0 142 69.7
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 2.8e-50 202.6 144 68.8
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 6.2e-50 201.4 144 66.0
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 8.1e-50 201.1 141 66.7
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.1e-49 200.7 142 67.6
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.4e-49 200.3 120 79.2
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.4e-49 200.3 141 63.8
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 3.1e-49 199.1 141 64.5
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 6.8e-49 198.0 130 73.1
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 2.0e-48 196.4 166 60.2
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 2.0e-48 196.4 121 74.4
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 4.4e-48 195.3 142 68.3
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.9e-47 191.8 160 62.5
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 6.4e-47 191.4 123 72.4
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 8.3e-47 191.0 149 59.7
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.4e-46 189.5 138 65.2
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 3.2e-46 189.1 142 65.5
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 1.2e-45 187.2 138 64.5
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.1e-45 186.4 160 60.6
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 3.5e-45 185.7 142 64.1
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 6.0e-45 184.9 146 60.3
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 1.1e-43 180.6 141 61.7
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 5.6e-43 178.3 141 60.3
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 3.6e-42 175.6 97 82.5
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 4.7e-42 175.3 147 55.8
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.8e-41 173.3 141 61.0
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 1.8e-41 173.3 142 61.3
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.2e-41 171.8 168 54.8
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.2e-40 170.6 105 77.1
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 9.2e-38 161.0 109 67.9
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.2e-37 160.6 155 51.0
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 4.6e-37 158.7 111 64.9
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 1.7e-36 156.8 98 75.5
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 1.2e-32 144.1 88 75.0
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 5.8e-32 141.7 81 79.0
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.1e-30 137.5 84 77.4
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.2e-30 136.0 84 77.4
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.2e-30 135.6 84 77.4
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.7e-29 132.9 139 48.9
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 1.7e-28 130.2 86 70.9
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 2.3e-28 129.8 143 43.4
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 9.0e-25 117.9 118 45.8
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 4.5e-24 115.5 118 44.1
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 4.5e-24 115.5 148 40.5
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 5.1e-20 102.1 111 45.9
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 4.8e-18 95.5 109 50.5
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 1.5e-16 90.5 132 40.2
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.0e-12 76.3 48 75.0
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.1e-11 74.3 120 39.2
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 3.7e-10 69.3 119 41.2
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.1e-06 57.8 28 92.9
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 7.1e-06 55.1 25 92.0
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 9.3e-06 54.7 30 86.7


User provided reference genes

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