Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.8e-37 158.7 78 100.0
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 3.0e-24 114.8 80 76.2
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 1.5e-23 112.5 79 73.4
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 4.4e-23 110.9 80 72.5
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 7.5e-23 110.2 81 75.3
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 3.7e-22 107.8 83 71.1
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 4.9e-22 107.5 85 71.8
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 4.9e-22 107.5 86 69.8
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 4.9e-22 107.5 86 69.8
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 6.3e-22 107.1 83 69.9
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 6.3e-22 107.1 83 72.3
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 8.3e-22 106.7 80 73.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 8.3e-22 106.7 79 73.4
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.4e-21 105.9 75 70.7
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.8e-21 105.5 78 74.4
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 2.4e-21 105.1 81 74.1
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.4e-21 105.1 75 69.3
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.1e-21 104.8 83 69.9
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 4.1e-21 104.4 83 67.5
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 5.4e-21 104.0 84 70.2
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 7.0e-21 103.6 85 68.2
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 7.0e-21 103.6 82 72.0
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.6e-20 102.4 83 68.7
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 1.6e-20 102.4 83 68.7
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 2.0e-20 102.1 83 73.5
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 2.0e-20 102.1 85 67.1
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.7e-20 101.7 82 67.1
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 2.7e-20 101.7 77 63.6
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 2.7e-20 101.7 77 63.6
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 2.7e-20 101.7 79 64.6
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 3.5e-20 101.3 84 69.0
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 4.5e-20 100.9 77 64.9
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 4.5e-20 100.9 83 67.5
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 4.5e-20 100.9 82 73.2
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 5.9e-20 100.5 82 70.7
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 7.7e-20 100.1 82 67.1
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 7.7e-20 100.1 76 64.5
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 7.7e-20 100.1 87 64.4
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.0e-19 99.8 82 68.3
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 1.7e-19 99.0 79 65.8
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 2.3e-19 98.6 77 64.9
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 2.3e-19 98.6 80 66.2
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 2.9e-19 98.2 78 66.7
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 2.9e-19 98.2 77 67.5
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 6.6e-19 97.1 82 64.6
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 6.6e-19 97.1 84 69.0
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 6.6e-19 97.1 82 67.1
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 8.6e-19 96.7 77 64.9
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 1.1e-18 96.3 82 68.3
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 1.5e-18 95.9 78 66.7
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.9e-18 95.5 76 68.4
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.9e-18 95.5 83 65.1
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 2.5e-18 95.1 77 64.9
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 2.5e-18 95.1 81 66.7
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 2.5e-18 95.1 84 67.9
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 3.3e-18 94.7 80 65.0
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 3.3e-18 94.7 81 69.1
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 4.2e-18 94.4 78 65.4
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 4.2e-18 94.4 78 65.4
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 4.2e-18 94.4 78 65.4
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 4.2e-18 94.4 68 69.1
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 5.5e-18 94.0 73 65.8
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 5.5e-18 94.0 79 65.8
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 7.2e-18 93.6 81 65.4
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 9.5e-18 93.2 51 82.4
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 9.5e-18 93.2 76 67.1
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 9.5e-18 93.2 78 64.1
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 9.5e-18 93.2 85 64.7
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 9.5e-18 93.2 82 64.6
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.2e-17 92.8 79 60.8
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.2e-17 92.8 84 64.3
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 1.2e-17 92.8 80 61.2
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 1.6e-17 92.4 76 67.1
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 1.6e-17 92.4 81 66.7
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 2.1e-17 92.0 58 72.4
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.1e-17 92.0 60 73.3
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 2.8e-17 91.7 78 64.1
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 2.8e-17 91.7 78 61.5
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.8e-17 91.7 78 64.1
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 4.7e-17 90.9 80 61.2
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 4.7e-17 90.9 81 61.7
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 4.7e-17 90.9 63 73.0
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 6.1e-17 90.5 79 62.0
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.0e-16 89.7 77 62.3
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.0e-16 89.7 77 62.3
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.0e-16 89.7 77 62.3
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 1.0e-16 89.7 77 62.3
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 1.0e-16 89.7 71 64.8
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 1.0e-16 89.7 83 65.1
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.0e-16 89.7 83 65.1
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.0e-16 89.7 83 65.1
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.4e-16 89.4 78 62.8
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.4e-16 89.4 81 63.0
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 3.0e-16 88.2 78 60.3
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 4.0e-16 87.8 80 62.5
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 4.0e-16 87.8 81 60.5
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.0e-16 87.8 83 63.9
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 4.0e-16 87.8 80 63.8
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 4.0e-16 87.8 80 63.8
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 5.2e-16 87.4 82 63.4
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 8.9e-16 86.7 68 63.2
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 1.5e-15 85.9 77 61.0
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 7.5e-15 83.6 78 60.3
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 7.5e-15 83.6 65 64.6
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.2e-14 82.0 71 62.0
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.2e-14 82.0 71 62.0
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 2.2e-14 82.0 85 52.9
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.8e-13 79.0 88 56.8
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 2.9e-11 71.6 80 56.2
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.9e-10 68.9 63 57.1
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 2.2e-06 55.5 48 68.8
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.9e-06 55.1 52 46.2
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 4.9e-06 54.3 50 50.0


User provided reference genes

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