Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 1.8e-249 865.5 468 100.0
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 3.6e-64 250.0 499 38.7
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 8.4e-53 212.2 471 33.3
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 7.6e-46 189.1 551 33.6
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 2.2e-45 187.6 526 32.1
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 1.4e-44 184.9 597 29.8
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 5.5e-44 183.0 594 29.3
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 5.5e-44 183.0 520 33.1
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 1.3e-42 178.3 540 30.6
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 3.9e-42 176.8 516 33.9
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 3.9e-42 176.8 484 34.3
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 7.4e-41 172.6 586 30.5
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 3.7e-40 170.2 496 31.9
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 4.8e-40 169.9 474 29.7
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 8.1e-40 169.1 579 30.1
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.1e-39 168.7 570 31.2
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 2.4e-39 167.5 580 30.3
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 2.4e-39 167.5 505 31.5
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 4.0e-39 166.8 578 28.9
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 5.3e-39 166.4 536 32.8
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 1.2e-38 165.2 589 29.5
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 3.8e-37 160.2 516 28.9
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 6.5e-37 159.5 527 31.7
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 8.4e-37 159.1 578 29.1
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 2.7e-35 154.1 530 31.5
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 6.0e-35 152.9 597 28.8
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 8.7e-34 149.1 542 26.9
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 1.5e-33 148.3 569 27.2
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 1.9e-33 147.9 501 32.5
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 5.7e-33 146.4 488 29.7
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 2.1e-32 144.4 611 26.0
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 2.8e-32 144.1 577 29.3
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 2.4e-31 141.0 474 29.7
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 2.4e-31 141.0 566 29.5
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 4.1e-31 140.2 645 28.1
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 5.3e-31 139.8 534 29.2
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.2e-30 138.7 580 27.9
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 1.5e-30 138.3 580 27.9
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.1e-28 132.1 547 28.3
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.1e-28 132.1 655 27.5
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 1.9e-28 131.3 473 29.0
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 9.3e-28 129.0 665 24.8
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 9.3e-28 129.0 474 27.8
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 2.7e-27 127.5 474 29.3
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 3.5e-27 127.1 475 28.4
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 6.1e-27 126.3 801 24.2
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 1.1e-25 122.1 601 25.6
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 1.5e-25 121.7 603 25.7
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 1.9e-25 121.3 352 34.1
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 7.4e-25 119.4 471 24.8
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 7.4e-25 119.4 555 27.4
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 9.7e-25 119.0 593 26.0
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.4e-23 115.2 472 26.3
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 1.4e-23 115.2 386 28.8
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 1.8e-23 114.8 462 25.5
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 3.1e-23 114.0 270 32.6
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 1.2e-22 112.1 380 28.7
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 3.4e-22 110.5 368 29.9
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 5.9e-22 109.8 74 68.9
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 5.9e-22 109.8 606 26.1
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 1.0e-21 109.0 467 25.9
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 2.2e-21 107.8 467 25.9
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.4e-20 105.1 463 24.6
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 1.4e-20 105.1 457 28.2
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 1.4e-20 105.1 75 65.3
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 1.9e-20 104.8 443 27.5
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 2.5e-20 104.4 447 27.5
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 5.5e-20 103.2 453 23.8
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 7.2e-20 102.8 462 24.0
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 9.4e-20 102.4 252 33.3
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 9.4e-20 102.4 490 25.5
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 1.2e-19 102.1 649 24.2
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 1.2e-19 102.1 70 70.0
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 1.6e-19 101.7 144 43.8
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 2.7e-19 100.9 68 75.0
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 2.7e-19 100.9 626 26.7
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 2.7e-19 100.9 455 24.2
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 2.7e-19 100.9 328 28.0
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 3.6e-19 100.5 252 32.9
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 4.6e-19 100.1 462 24.7
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 7.9e-19 99.4 558 26.0
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 3.0e-18 97.4 464 24.4
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 3.0e-18 97.4 270 32.6
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 1.5e-17 95.1 110 47.3
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 7.4e-17 92.8 84 54.8
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 9.7e-17 92.4 70 60.0
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.3e-16 92.0 71 64.8
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 1.3e-16 92.0 592 26.2
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 1.3e-16 92.0 336 27.4
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 1.3e-16 92.0 74 55.4
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 2.2e-16 91.3 470 23.8
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 6.3e-16 89.7 389 27.8
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 6.3e-16 89.7 137 39.4
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 8.2e-16 89.4 472 23.3
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 1.4e-15 88.6 94 48.9
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 2.4e-15 87.8 636 23.9
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 5.3e-15 86.7 153 35.3
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 6.9e-15 86.3 87 49.4
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 9.1e-15 85.9 479 23.4
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 9.1e-15 85.9 154 33.8
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 3.4e-14 84.0 469 23.9
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 4.5e-14 83.6 73 52.1
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 5.9e-14 83.2 68 58.8
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.3e-13 82.0 457 22.3
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 1.7e-13 81.6 455 23.5
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 1.7e-13 81.6 458 24.0
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 3.8e-13 80.5 171 33.9
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 5.0e-13 80.1 472 24.2
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 8.5e-13 79.3 50 72.0
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 8.5e-13 79.3 66 56.1
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 1.1e-12 79.0 455 23.5
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 1.1e-12 79.0 455 23.5
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 1.4e-12 78.6 458 23.4
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 1.9e-12 78.2 96 42.7
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 4.2e-12 77.0 72 48.6
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 5.5e-12 76.6 455 23.3
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 3.6e-11 73.9 154 33.1
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 8.8e-10 69.3 153 33.3
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 2.6e-09 67.8 57 54.4
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 7.4e-09 66.2 108 35.2
Thhalv10022484m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 1.7e-08 65.1 187 27.8
ATR0609G018 Amborella trichopoda HOM05D007504 ORTHO05D007629 2.8e-08 64.3 157 29.3
HPP92_020229 Vanilla planifolia HOM05D007504 ORTHO05D007629 1.6e-06 58.5 55 43.6


User provided reference genes

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