Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01322 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.0e-34 147.1 70 100.0
Eucgr.L03553 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.0e-34 147.1 70 100.0
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.9e-23 110.9 77 75.3
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-20 101.7 77 64.9
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.9e-20 100.1 77 66.2
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-19 98.6 77 64.9
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-19 98.6 77 64.9
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-19 98.6 77 67.5
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.4e-19 97.8 77 64.9
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.9e-19 97.1 77 63.6
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-18 95.5 77 63.6
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.8e-18 94.4 77 62.3
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.4e-17 92.4 77 61.0
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.9e-17 92.0 76 63.2
Eucgr.L03552 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.8e-13 78.2 76 55.3
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 9.1e-12 73.2 76 50.0
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-11 72.0 78 50.0
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 4.5e-11 70.9 78 50.0
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.7e-10 68.9 78 47.4
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 3.8e-10 67.8 83 45.8
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.0e-10 67.4 77 46.8
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.1e-09 66.2 77 45.5
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.1e-09 66.2 77 45.5
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 1.5e-09 65.9 71 49.3
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.9e-09 65.5 76 46.1
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.9e-09 65.5 76 46.1
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.2e-09 64.7 77 45.5
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.2e-09 64.7 77 45.5
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 1.2e-08 62.8 76 42.1
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.6e-08 62.4 78 44.9
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 2.7e-08 61.6 71 46.5
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 2.7e-08 61.6 77 44.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 2.7e-08 61.6 78 47.4
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 2.7e-08 61.6 79 44.3
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.7e-08 61.6 77 44.2
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 3.6e-08 61.2 79 45.6
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.1e-08 60.5 76 47.4
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 6.1e-08 60.5 83 41.0
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.4e-07 59.3 83 41.0
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 1.8e-07 58.9 79 44.3
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 1.8e-07 58.9 79 44.3
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 1.8e-07 58.9 79 44.3
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.8e-07 58.9 76 47.4
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.3e-07 58.5 67 47.8
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.3e-07 58.5 67 47.8
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 3.0e-07 58.2 79 44.3
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.0e-07 58.2 84 41.7
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 3.0e-07 58.2 79 43.0
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 3.0e-07 58.2 77 42.9
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 3.0e-07 58.2 77 42.9
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 3.0e-07 58.2 77 42.9
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 4.0e-07 57.8 79 41.8
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 5.2e-07 57.4 79 44.3
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 5.2e-07 57.4 79 44.3
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 5.2e-07 57.4 79 44.3
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 5.2e-07 57.4 77 42.9
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 5.2e-07 57.4 74 45.9
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 5.2e-07 57.4 78 44.9
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 6.7e-07 57.0 76 42.1
AUR62000479 Chenopodium quinoa HOM05D002165 ORTHO05D001531 8.8e-07 56.6 69 37.7
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.8e-07 56.6 67 44.8
Aqoxy2G02476 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 1.2e-06 56.2 78 37.2
AUR62006822 Chenopodium quinoa HOM05D002165 ORTHO05D001531 1.2e-06 56.2 69 37.7
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 1.2e-06 56.2 68 48.5
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.2e-06 56.2 67 44.8
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 1.5e-06 55.8 71 45.1
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.5e-06 55.8 76 42.1
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 1.5e-06 55.8 79 43.0
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 1.5e-06 55.8 74 44.6
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 1.5e-06 55.8 74 44.6
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 1.5e-06 55.8 74 44.6
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.5e-06 55.8 84 39.3
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 1.5e-06 55.8 83 41.0
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 1.5e-06 55.8 68 47.1
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 1.5e-06 55.8 68 47.1
Prupe.4G278700 Prunus persica HOM05D002165 ORTHO05D001531 1.5e-06 55.8 83 41.0
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 43.0
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 40.5
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 40.5
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 40.5
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 40.5
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 40.5
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 2.0e-06 55.5 79 40.5
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.0e-06 55.5 76 47.4
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 2.6e-06 55.1 79 44.3
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 2.6e-06 55.1 79 40.5
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.6e-06 55.1 76 46.1
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 2.6e-06 55.1 67 44.8
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 3.3e-06 54.7 39 53.8
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 3.3e-06 54.7 69 44.9
Sabra13G0001300 Salix brachista HOM05D002165 ORTHO05D001531 3.3e-06 54.7 81 43.2
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 4.4e-06 54.3 74 43.2
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 4.4e-06 54.3 74 43.2
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 4.4e-06 54.3 74 43.2
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 4.4e-06 54.3 77 40.3
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 4.4e-06 54.3 79 41.8
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 5.7e-06 53.9 81 40.7
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 5.7e-06 53.9 69 43.5
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 7.5e-06 53.5 79 41.8
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 7.5e-06 53.5 80 41.2
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 7.5e-06 53.5 76 38.2
Ah.10g026790 Amaranthus hybridus HOM05D002165 ORTHO05D001531 9.7e-06 53.1 67 37.3
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 9.7e-06 53.1 71 40.8
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 9.7e-06 53.1 77 40.3


User provided reference genes

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