Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 7.7e-72 273.9 154 100.0
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.2e-71 272.3 154 98.7
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 5.4e-57 224.6 128 81.2
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 2.3e-55 219.2 128 78.9
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 4.3e-54 214.9 128 76.6
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.2e-53 213.4 128 76.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.2e-53 213.4 127 76.4
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 1.2e-53 213.4 152 77.6
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 3.6e-53 211.8 128 75.0
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.0e-52 210.3 127 76.4
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 1.8e-52 209.5 127 75.6
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 2.3e-52 209.1 151 75.5
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 3.1e-52 208.8 154 71.4
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 4.0e-52 208.4 128 75.0
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 8.9e-52 207.2 151 76.2
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.2e-51 206.8 151 68.2
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.5e-51 206.5 128 74.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.0e-51 206.1 131 74.0
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 3.4e-51 205.3 125 73.6
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 7.5e-51 204.1 130 73.8
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.3e-50 203.4 127 75.6
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.2e-50 202.6 154 69.5
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.9e-50 202.2 127 74.0
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 4.9e-50 201.4 128 71.9
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 4.1e-49 198.4 127 71.7
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 4.1e-49 198.4 127 71.7
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 5.4e-49 198.0 149 67.8
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.0e-49 197.6 127 70.9
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.2e-49 197.2 125 71.2
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.2e-48 196.8 126 72.2
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.0e-48 196.1 118 78.0
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.7e-48 195.7 122 73.0
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 7.8e-48 194.1 125 70.4
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.3e-47 193.4 127 71.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.7e-47 193.0 128 69.5
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.3e-47 192.6 126 68.3
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 5.0e-47 191.4 154 68.2
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 6.6e-47 191.0 122 73.0
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.6e-47 191.0 128 71.1
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 8.6e-47 190.7 154 68.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.5e-46 189.9 127 67.7
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.9e-46 189.5 117 71.8
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 2.5e-46 189.1 127 69.3
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 3.3e-46 188.7 122 70.5
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 3.3e-46 188.7 122 70.5
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 1.6e-45 186.4 151 68.9
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 2.1e-45 186.0 154 65.6
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.1e-45 186.0 118 72.0
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.8e-45 185.7 151 66.9
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 3.6e-45 185.3 126 67.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 3.6e-45 185.3 128 70.3
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 3.6e-45 185.3 128 68.0
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.2e-45 184.5 128 68.0
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.1e-44 183.7 127 70.9
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.4e-44 183.3 125 66.4
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.4e-44 183.3 151 68.2
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 5.2e-44 181.4 128 66.4
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 5.2e-44 181.4 126 69.8
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 6.8e-44 181.0 151 66.9
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 8.9e-44 180.6 125 67.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 7.5e-43 177.6 148 66.2
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.3e-42 176.8 130 64.6
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-42 176.4 173 51.4
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 3.7e-42 175.3 125 64.8
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 3.7e-42 175.3 128 68.0
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 4.9e-42 174.9 151 64.2
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 6.4e-42 174.5 154 57.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.1e-41 173.7 110 70.0
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 2.4e-41 172.6 126 66.7
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 3.2e-41 172.2 128 62.5
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 3.2e-41 172.2 129 63.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 7.1e-41 171.0 126 65.1
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 7.1e-41 171.0 126 65.9
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 7.1e-41 171.0 126 65.9
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 7.1e-41 171.0 126 65.9
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 7.1e-41 171.0 126 65.9
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 7.1e-41 171.0 100 77.0
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 9.2e-41 170.6 127 64.6
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.2e-40 170.2 126 65.9
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.2e-40 170.2 127 66.9
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 2.1e-40 169.5 127 62.2
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 2.1e-40 169.5 126 63.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 2.1e-40 169.5 128 61.7
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.7e-40 169.1 127 62.2
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.5e-40 168.7 109 71.6
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 6.0e-40 167.9 118 64.4
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 7.8e-40 167.5 133 67.7
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.0e-39 167.2 168 53.6
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.7e-39 166.4 132 62.9
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.7e-39 166.4 127 64.6
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.7e-39 166.4 132 62.9
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 3.0e-39 165.6 132 62.1
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 3.0e-39 165.6 132 62.1
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 3.0e-39 165.6 99 76.8
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 3.0e-39 165.6 127 60.6
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 5.1e-39 164.9 127 63.8
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 6.6e-39 164.5 127 63.0
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 8.6e-39 164.1 128 60.2
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.9e-38 162.9 109 68.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 2.5e-38 162.5 128 64.8
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 3.3e-38 162.2 127 59.8
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 4.3e-38 161.8 126 60.3
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 5.6e-38 161.4 126 61.1
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.2e-37 160.2 125 60.8
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 1.6e-37 159.8 104 70.2
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 1.6e-37 159.8 104 70.2
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.6e-37 159.8 122 60.7
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 4.7e-37 158.3 122 59.0
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 8.9e-36 154.1 127 62.2
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 2.0e-35 152.9 128 59.4
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 3.4e-35 152.1 128 58.6
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.8e-35 151.4 78 96.2
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.4e-33 146.7 95 95.8
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 5.4e-33 144.8 124 58.1
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 6.6e-31 137.9 87 70.1
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 4.3e-30 135.2 84 70.2
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 3.1e-28 129.0 106 56.6
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 4.9e-26 121.7 101 52.5
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 6.4e-26 121.3 101 55.4
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 1.7e-23 113.2 89 62.9
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.7e-23 113.2 101 51.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 4.3e-22 108.6 61 77.0
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 9.6e-22 107.5 101 50.5
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 6.9e-20 101.3 125 44.8
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.0e-19 99.8 61 72.1
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.7e-18 96.7 61 67.2
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 6.4e-18 94.7 67 65.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.9e-17 93.2 68 63.2
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.4e-17 92.8 61 67.2
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.4e-17 92.8 64 67.2
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.9e-15 85.5 57 64.9
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.1e-14 84.0 66 54.5
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 5.3e-12 75.1 49 71.4
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 2.7e-08 62.8 98 31.6
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.6e-08 62.0 58 43.1
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 7.9e-08 61.2 60 55.0
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 1.0e-07 60.8 34 79.4
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 6.7e-07 58.2 96 32.3


User provided reference genes

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