Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.7e-38 162.2 82 100.0
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 2.9e-25 118.2 78 80.8
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.4e-24 115.9 78 74.4
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 2.4e-24 115.2 79 68.4
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 7.1e-24 113.6 74 74.3
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 2.1e-23 112.1 77 68.8
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 2.1e-23 112.1 70 75.7
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 3.5e-23 111.3 77 67.5
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 4.6e-23 110.9 77 67.5
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.0e-22 109.8 77 72.7
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 2.3e-22 108.6 77 67.5
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 2.3e-22 108.6 77 66.2
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 3.9e-22 107.8 78 67.9
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 3.9e-22 107.8 74 67.6
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 3.9e-22 107.8 78 66.7
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 3.9e-22 107.8 80 66.2
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 3.9e-22 107.8 77 70.1
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 8.7e-22 106.7 78 66.7
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 8.7e-22 106.7 78 66.7
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 8.7e-22 106.7 78 66.7
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 8.7e-22 106.7 77 64.9
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 1.1e-21 106.3 77 66.2
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 1.5e-21 105.9 78 64.1
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 1.9e-21 105.5 77 64.9
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 1.9e-21 105.5 77 63.6
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.5e-21 105.1 74 64.9
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 2.5e-21 105.1 77 64.9
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 4.3e-21 104.4 82 64.6
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 4.3e-21 104.4 71 70.4
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 4.3e-21 104.4 80 63.8
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 5.6e-21 104.0 68 72.1
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 9.6e-21 103.2 82 64.6
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 1.3e-20 102.8 77 64.9
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 1.6e-20 102.4 79 62.0
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 2.1e-20 102.1 77 64.9
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 2.1e-20 102.1 71 63.4
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 4.8e-20 100.9 77 63.6
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 4.8e-20 100.9 76 68.4
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 6.2e-20 100.5 78 61.5
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 6.2e-20 100.5 76 61.8
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 6.2e-20 100.5 77 59.7
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 6.2e-20 100.5 77 59.7
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 6.2e-20 100.5 77 61.0
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 8.1e-20 100.1 82 63.4
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 8.1e-20 100.1 73 65.8
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 1.1e-19 99.8 80 62.5
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 1.4e-19 99.4 77 61.0
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 1.8e-19 99.0 77 61.0
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 1.8e-19 99.0 70 68.6
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 1.8e-19 99.0 77 62.3
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 1.8e-19 99.0 80 63.8
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 2.4e-19 98.6 77 58.4
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 2.4e-19 98.6 80 61.2
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 3.1e-19 98.2 82 58.5
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 4.0e-19 97.8 70 67.1
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 5.3e-19 97.4 80 58.8
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 5.3e-19 97.4 74 62.2
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 6.9e-19 97.1 74 63.5
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 6.9e-19 97.1 77 59.7
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 9.0e-19 96.7 106 50.0
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 9.0e-19 96.7 77 55.8
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 9.0e-19 96.7 63 68.3
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 9.0e-19 96.7 80 62.5
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.2e-18 96.3 70 67.1
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 2.0e-18 95.5 80 57.5
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 2.0e-18 95.5 73 64.4
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 3.4e-18 94.7 77 58.4
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 5.8e-18 94.0 77 61.0
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 5.8e-18 94.0 77 59.7
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 1.7e-17 92.4 80 56.2
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 3.8e-17 91.3 79 57.0
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 3.8e-17 91.3 78 55.1
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 6.5e-17 90.5 78 59.0
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 8.4e-17 90.1 77 55.8
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 8.4e-17 90.1 77 58.4
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 1.4e-16 89.4 64 68.8
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 2.5e-16 88.6 80 55.0
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 3.2e-16 88.2 69 65.2
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 5.5e-16 87.4 64 65.6
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 7.1e-16 87.0 69 66.7
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 2.7e-15 85.1 52 76.9
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 7.9e-15 83.6 65 61.5
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 1.3e-14 82.8 67 58.2
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 1.3e-14 82.8 67 58.2
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 2.3e-14 82.0 50 76.0
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 2.3e-14 82.0 67 61.2
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 3.0e-14 81.6 53 67.9
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 8.7e-14 80.1 62 59.7
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 8.7e-14 80.1 62 59.7
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 1.5e-13 79.3 65 64.6
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.5e-13 79.3 57 64.9
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.3e-12 76.3 62 58.1
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 2.1e-12 75.5 77 54.5
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.8e-12 75.1 62 54.8
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 2.8e-12 75.1 70 52.9
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.1e-11 73.2 48 70.8
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 1.2e-10 69.7 51 58.8
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.5e-10 69.3 55 56.4
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 3.2e-08 61.6 46 54.3
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 3.9e-06 54.7 53 49.1


User provided reference genes

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