Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 0.0e+00 1468.8 776 100.0
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 1.6e-173 614.0 826 50.1
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 9.6e-171 604.7 847 48.3
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 2.7e-165 586.6 819 48.6
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.6e-162 577.4 841 48.4
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 2.1e-162 577.0 842 46.9
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 4.8e-162 575.9 849 46.5
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 4.1e-161 572.8 820 47.2
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 3.4e-160 569.7 822 48.4
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 6.5e-159 565.5 879 47.0
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 2.5e-158 563.5 843 46.3
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 5.5e-158 562.4 693 50.8
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 9.3e-158 561.6 840 46.5
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 1.6e-157 560.8 855 45.5
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 2.1e-157 560.5 834 44.6
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 3.6e-157 559.7 834 46.5
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 4.6e-157 559.3 829 47.9
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 1.0e-156 558.1 833 47.1
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 6.7e-156 555.4 805 47.0
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 2.5e-155 553.5 835 46.0
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 2.5e-155 553.5 802 47.9
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 5.7e-155 552.4 838 47.1
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 9.7e-155 551.6 837 46.5
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 1.3e-154 551.2 834 46.0
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 1.3e-154 551.2 849 46.3
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 1.6e-154 550.8 830 46.3
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.8e-154 550.1 839 46.8
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.8e-153 547.4 813 46.6
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 3.4e-152 543.1 863 44.4
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 2.2e-151 540.4 841 45.3
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 5.0e-151 539.3 851 45.2
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 1.4e-150 537.7 913 43.7
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 2.5e-150 537.0 836 44.6
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 9.4e-150 535.0 847 44.7
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.5e-147 527.7 844 45.0
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 9.1e-145 518.5 876 44.2
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 2.0e-144 517.3 866 43.4
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 2.9e-143 513.5 849 43.0
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 6.5e-143 512.3 877 43.2
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 9.4e-142 508.4 822 46.7
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.4e-140 504.6 841 44.0
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 1.8e-140 504.2 886 44.9
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 2.2e-138 497.3 899 41.4
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 2.8e-138 496.9 791 43.0
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 5.3e-137 492.7 909 40.6
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.5e-134 483.8 549 53.7
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 2.7e-133 480.3 864 41.2
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 8.8e-132 475.3 782 41.8
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 5.7e-131 472.6 870 41.7
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 6.3e-130 469.2 798 42.1
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 3.5e-128 463.4 576 49.5
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 5.9e-128 462.6 787 41.7
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 3.8e-127 459.9 873 42.0
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 6.5e-127 459.1 849 41.2
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 1.1e-126 458.4 930 39.7
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 2.7e-125 453.8 825 40.5
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 4.0e-124 449.9 823 40.5
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 2.6e-123 447.2 735 42.7
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 3.4e-123 446.8 797 42.2
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 9.8e-123 445.3 808 42.5
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 2.8e-122 443.7 782 41.3
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 4.8e-122 443.0 846 41.8
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 4.8e-122 443.0 819 39.9
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 4.1e-121 439.9 870 40.3
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 1.6e-120 438.0 809 40.0
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 3.5e-120 436.8 782 41.0
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 3.5e-120 436.8 638 45.0
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 5.0e-119 433.0 678 43.7
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 6.5e-119 432.6 874 38.8
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 4.2e-118 429.9 792 40.9
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 4.2e-118 429.9 792 40.9
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 1.2e-117 428.3 823 39.5
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 2.8e-117 427.2 815 39.5
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 4.7e-117 426.4 788 40.7
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 4.7e-117 426.4 788 40.7
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 6.1e-117 426.0 807 39.7
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 3.0e-116 423.7 413 58.6
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 1.3e-114 418.3 524 50.0
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 8.3e-114 415.6 741 41.8
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 1.1e-113 415.2 799 42.3
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 1.4e-113 414.8 531 50.5
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 2.3e-111 407.5 875 39.3
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 4.4e-107 393.3 740 41.4
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 9.8e-107 392.1 845 37.3
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 1.1e-105 388.7 561 44.6
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 9.2e-105 385.6 549 45.5
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 3.9e-103 380.2 887 37.0
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 3.9e-103 380.2 743 38.8
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 7.3e-102 375.9 899 35.6
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 4.0e-100 370.2 903 35.9
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 3.2e-97 360.5 788 35.9
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 1.2e-93 348.6 823 34.1
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 1.6e-93 348.2 547 43.1
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.3e-92 344.4 794 35.5
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 4.1e-89 333.6 350 55.1
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 5.4e-89 333.2 485 46.2
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.1e-86 325.5 581 40.1
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 7.1e-81 306.2 747 33.9
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 1.1e-76 292.4 342 50.9
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.2e-76 290.0 371 51.2
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 2.6e-75 287.7 573 38.0
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.4e-65 255.4 359 47.4
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 3.2e-65 254.2 726 32.8
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 3.1e-60 237.7 411 43.1
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.7e-58 231.9 194 62.4
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 8.4e-58 229.6 282 47.9
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 6.9e-52 209.9 215 54.9
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 1.4e-49 202.2 479 38.2
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 1.6e-48 198.7 527 35.7
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 2.5e-46 191.4 143 67.8
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 2.8e-45 188.0 499 35.3
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 3.9e-39 167.5 202 53.0
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 9.7e-30 136.3 231 47.2
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.2e-29 135.2 91 71.4
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 7.7e-27 126.7 97 63.9
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.4e-23 115.9 114 61.4
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 9.7e-22 109.8 363 31.1
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.3e-21 109.4 86 68.6
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 1.7e-21 109.0 119 51.3
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.8e-15 89.0 59 71.2
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 4.0e-15 87.8 76 57.9
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.0e-14 85.5 66 63.6
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.7e-13 82.4 53 73.6
BcaB03g12895 Brassica carinata HOM05D002848 ORTHO05D003043 2.4e-12 78.6 256 30.5
Sp1g17660 Schrenkiella parvula HOM05D002848 ORTHO05D003043 5.3e-12 77.4 167 34.1
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.2e-11 76.3 70 54.3
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 1.6e-11 75.9 154 31.8
BolC8t49614H Brassica oleracea HOM05D002848 ORTHO05D003043 2.0e-11 75.5 209 31.6
BcaC07g39005 Brassica carinata HOM05D002848 ORTHO05D003043 2.7e-11 75.1 209 31.6
C08p19770 Brassica napus HOM05D002848 ORTHO05D003043 2.7e-11 75.1 209 31.6
BraA08t34900Z Brassica rapa HOM05D002848 ORTHO05D003043 2.7e-11 75.1 208 31.2
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 5.9e-11 73.9 87 41.4
Actinidia02762 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.3e-10 72.8 93 55.9
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.3e-10 72.8 212 30.7
CARHR020360 Cardamine hirsuta HOM05D002848 ORTHO05D003043 1.7e-10 72.4 167 31.7
A08p29640 Brassica napus HOM05D002848 ORTHO05D003043 3.8e-10 71.2 209 30.1
AL1G32590 Arabidopsis lyrata HOM05D002848 ORTHO05D003043 1.5e-09 69.3 170 31.2
Carub.0001s1938 Capsella rubella HOM05D002848 ORTHO05D003043 1.9e-09 68.9 167 31.7
CAN.G1671.1 Capsicum annuum HOM05D002848 ORTHO05D003043 2.5e-09 68.6 77 45.5
ECA233G1527 Erigeron canadensis HOM05D002848 ORTHO05D003043 9.4e-09 66.6 146 32.2
A06p16060 Brassica napus HOM05D002848 ORTHO05D003043 2.1e-08 65.5 165 31.5
BraA06t24712Z Brassica rapa HOM05D002848 ORTHO05D003043 2.1e-08 65.5 165 31.5
AT1G19860 Arabidopsis thaliana HOM05D002848 ORTHO05D003043 2.7e-08 65.1 167 31.7
BcaC05g25878 Brassica carinata HOM05D002848 ORTHO05D003043 3.6e-08 64.7 168 32.1
BolC5t30542H Brassica oleracea HOM05D002848 ORTHO05D003043 3.6e-08 64.7 168 32.1
THA.LOC104811391 Tarenaya hassleriana HOM05D002848 ORTHO05D003043 3.6e-08 64.7 168 31.0
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 4.7e-08 64.3 212 28.3
Actinidia22990 Actinidia chinensis HOM05D002848 ORTHO05D003043 6.1e-08 63.9 93 37.6
BcaB07g32004 Brassica carinata HOM05D002848 ORTHO05D003043 6.1e-08 63.9 168 31.5
Gohir.D11G184300 Gossypium hirsutum HOM05D002848 ORTHO05D003043 8.0e-08 63.5 94 41.5
Gorai.007G196000 Gossypium raimondii HOM05D002848 ORTHO05D003043 8.0e-08 63.5 94 41.5
MD02G1134000 Malus domestica HOM05D002848 ORTHO05D003043 8.0e-08 63.5 92 41.3
C05p18320 Brassica napus HOM05D002848 ORTHO05D003043 1.0e-07 63.2 168 32.1
Duzib187G1527 Durio zibethinus HOM05D002848 ORTHO05D003043 1.4e-07 62.8 126 34.1
Glyma.02G049700 Glycine max HOM05D002848 ORTHO05D003043 1.4e-07 62.8 121 38.8
Gohir.A11G176500 Gossypium hirsutum HOM05D002848 ORTHO05D003043 1.4e-07 62.8 88 42.0
Glyma.02G049600 Glycine max HOM05D002848 ORTHO05D003043 1.8e-07 62.4 165 31.5
Lsat_1_v5_gn_8_31441 Lactuca sativa HOM05D002848 ORTHO05D003043 4.0e-07 61.2 113 34.5
Thhalv10007764m.g Eutrema salsugineum HOM05D002848 ORTHO05D003043 5.2e-07 60.8 167 31.1
Mapoly0111s0041 Marchantia polymorpha HOM05D002848 ORTHO05D003043 5.2e-07 60.8 113 35.4
VMungo0251G2011 Vigna mungo HOM05D002848 ORTHO05D003043 5.2e-07 60.8 93 38.7
Actinidia15403 Actinidia chinensis HOM05D002848 ORTHO05D003043 6.8e-07 60.5 111 36.9
CBR_g36670 Chara braunii HOM05D002848 ORTHO05D003043 6.8e-07 60.5 153 29.4
HanXRQChr12g0367651 Helianthus annuus HOM05D002848 ORTHO05D003043 6.8e-07 60.5 199 27.6
Lj2g0018127 Lotus japonicus HOM05D002848 ORTHO05D003043 8.8e-07 60.1 146 30.1
Nitab4.5_0005721g0090 Nicotiana tabacum HOM05D002848 ORTHO05D003043 8.8e-07 60.1 95 37.9
TAR381G0737 Trochodendron aralioides HOM05D002848 ORTHO05D003043 8.8e-07 60.1 96 37.5
Nitab4.5_0004254g0010 Nicotiana tabacum HOM05D002848 ORTHO05D030274 1.2e-06 59.7 78 39.7
CsaV3_6G046970 Cucumis sativus L. HOM05D002848 ORTHO05D003043 1.5e-06 59.3 72 43.1
CSS0044135 Camellia sinensis var. sinensis HOM05D002848 ORTHO05D003043 2.0e-06 58.9 131 35.1
Oeu007349.2 Olea europaea HOM05D002848 ORTHO05D003043 2.0e-06 58.9 158 32.3
Phvul.002G110100 Phaseolus vulgaris HOM05D002848 ORTHO05D003043 2.0e-06 58.9 73 42.5
CAN.G724.40 Capsicum annuum HOM05D002848 ORTHO05D003043 2.6e-06 58.5 75 44.0
Pp3c5_3550 Physcomitrium patens HOM05D002848 ORTHO05D003043 2.6e-06 58.5 109 35.8
TPR.G3788 Trifolium pratense HOM05D002848 ORTHO05D003043 2.6e-06 58.5 140 32.1
CiPaw.08G064200 Carya illinoinensis HOM05D002848 ORTHO05D003043 3.4e-06 58.2 124 35.5
Pp3c6_19540 Physcomitrium patens HOM05D002848 ORTHO05D003043 3.4e-06 58.2 113 38.9
CSS0049415 Camellia sinensis var. sinensis HOM05D002848 ORTHO05D003043 4.4e-06 57.8 159 30.8
VMungo1309G0824 Vigna mungo HOM05D002848 ORTHO05D003043 4.4e-06 57.8 198 30.3
CiPaw.08G132900 Carya illinoinensis HOM05D002848 ORTHO05D003043 5.7e-06 57.4 90 37.8
COL.COLO4_21931 Corchorus olitorius HOM05D002848 ORTHO05D003043 7.5e-06 57.0 102 38.2
Phvul.009G015300 Phaseolus vulgaris HOM05D002848 ORTHO05D003043 7.5e-06 57.0 151 32.5
Potri.005G116001 Populus trichocarpa HOM05D002848 ORTHO05D003043 7.5e-06 57.0 73 42.5
Sabra05G0095000 Salix brachista HOM05D002848 ORTHO05D003043 7.5e-06 57.0 72 41.7
MD15G1247000 Malus domestica HOM05D002848 ORTHO05D003043 9.8e-06 56.6 143 32.2
Medtr1g019120 Medicago truncatula HOM05D002848 ORTHO05D003043 9.8e-06 56.6 139 31.7
Solyc02g084200.3 Solanum lycopersicum HOM05D002848 ORTHO05D003043 9.8e-06 56.6 101 34.7


User provided reference genes

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