Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 1.5e-110 402.9 207 100.0
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 2.0e-75 286.2 204 71.1
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 2.0e-75 286.2 204 71.1
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 1.0e-71 273.9 204 70.1
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 1.8e-71 273.1 204 70.6
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 1.8e-71 273.1 204 69.1
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 1.1e-70 270.4 204 69.6
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 7.4e-70 267.7 204 68.6
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 8.2e-69 264.2 204 68.1
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.1e-68 263.8 204 67.2
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.4e-68 263.5 202 67.8
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 2.4e-68 262.7 204 67.6
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 9.1e-68 260.8 203 68.0
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 1.6e-67 260.0 204 65.7
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 2.6e-67 259.2 204 67.6
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 3.5e-67 258.8 204 68.1
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 1.7e-66 256.5 204 66.7
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 2.2e-66 256.1 207 65.7
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.9e-66 255.8 206 65.5
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 1.5e-65 253.4 205 63.9
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 1.5e-65 253.4 205 63.9
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.5e-65 253.4 204 66.2
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 1.5e-65 253.4 204 65.2
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 1.9e-65 253.1 205 64.4
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 2.5e-65 252.7 205 63.9
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 3.2e-65 252.3 205 63.4
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 4.2e-65 251.9 205 63.4
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 4.2e-65 251.9 204 66.2
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 7.2e-65 251.1 204 65.2
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 2.1e-64 249.6 204 65.2
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 3.6e-64 248.8 204 65.2
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 3.6e-64 248.8 204 65.2
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.6e-64 248.8 207 63.8
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 3.6e-64 248.8 204 66.2
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 4.7e-64 248.4 206 65.0
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 4.7e-64 248.4 204 66.2
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 4.7e-64 248.4 204 65.7
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 4.7e-64 248.4 205 64.9
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 6.1e-64 248.1 205 62.4
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 1.0e-63 247.3 205 62.9
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 1.0e-63 247.3 206 65.0
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 1.0e-63 247.3 204 64.2
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 1.0e-63 247.3 204 65.2
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 1.0e-63 247.3 204 65.7
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.8e-63 246.5 206 65.5
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 2.3e-63 246.1 205 62.9
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 2.3e-63 246.1 207 62.3
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 2.3e-63 246.1 204 65.7
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 3.0e-63 245.7 204 62.7
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 4.0e-63 245.4 204 63.2
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 4.0e-63 245.4 205 62.4
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 4.0e-63 245.4 204 62.7
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 5.2e-63 245.0 204 64.7
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 6.7e-63 244.6 204 65.7
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 8.8e-63 244.2 204 65.2
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.2e-62 243.8 205 61.5
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 1.5e-62 243.4 199 65.3
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 1.5e-62 243.4 204 62.3
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 2.0e-62 243.0 207 62.3
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 4.4e-62 241.9 204 62.3
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 1.3e-61 240.4 205 61.5
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 1.7e-61 240.0 193 67.9
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 2.2e-61 239.6 205 61.0
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 2.2e-61 239.6 204 62.7
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 2.2e-61 239.6 204 60.3
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 2.8e-61 239.2 205 62.4
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 2.8e-61 239.2 205 62.4
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 3.7e-61 238.8 204 63.2
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 6.3e-61 238.0 205 60.5
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 6.3e-61 238.0 204 61.3
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 6.3e-61 238.0 205 62.9
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 1.4e-60 236.9 241 55.6
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 1.6e-59 233.4 205 62.4
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 5.9e-59 231.5 204 61.3
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 7.7e-59 231.1 204 60.3
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.0e-58 230.7 204 60.8
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 1.3e-58 230.3 196 63.8
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 1.3e-58 230.3 239 56.1
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 5.0e-58 228.4 207 59.9
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 6.5e-58 228.0 209 62.2
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 6.5e-58 228.0 209 62.2
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 1.1e-57 227.3 207 59.4
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 1.1e-57 227.3 204 61.8
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 2.5e-57 226.1 204 59.3
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 1.6e-56 223.4 196 59.7
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.6e-56 223.4 200 60.0
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 2.7e-56 222.6 204 57.8
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 5.7e-54 214.9 205 59.0
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 3.7e-53 212.2 289 46.0
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 1.4e-52 210.3 204 57.8
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 1.4e-52 210.3 204 55.4
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 4.1e-52 208.8 204 55.9
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 2.0e-51 206.5 204 53.9
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 2.0e-51 206.5 204 54.4
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 1.0e-50 204.1 204 54.4
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 3.8e-50 202.2 204 55.9
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 8.6e-50 201.1 169 65.1
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.9e-49 199.9 204 55.9
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 2.5e-49 199.5 197 57.9
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 7.2e-49 198.0 204 55.9
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 7.2e-49 198.0 197 56.3
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 2.1e-48 196.4 205 51.7
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 4.7e-48 195.3 194 56.2
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 8.0e-48 194.5 204 52.9
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 5.9e-43 178.3 199 52.8
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 5.0e-42 175.3 154 59.7
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 2.0e-35 153.3 198 45.5
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 6.6e-34 148.3 199 46.2
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 1.7e-29 133.7 130 59.2
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 6.6e-26 121.7 198 40.4
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 1.2e-24 117.5 128 53.1
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 3.1e-23 112.8 128 51.6
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 2.4e-15 86.7 134 41.8
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 5.2e-15 85.5 53 69.8
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 1.9e-12 77.0 77 51.9
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.5e-11 72.8 45 71.1
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 5.6e-09 65.5 211 28.9
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 1.2e-08 64.3 34 82.4
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 4.0e-07 59.3 70 54.3


User provided reference genes

Program Settings