Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 2.8e-49 198.4 106 100.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 8.0e-36 153.7 104 76.0
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.0e-35 153.3 102 76.5
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 2.3e-35 152.1 102 77.5
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 3.0e-35 151.8 101 75.2
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 8.9e-35 150.2 106 72.6
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 8.9e-35 150.2 103 72.8
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.2e-34 149.8 103 71.8
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 3.4e-34 148.3 103 72.8
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 3.4e-34 148.3 103 73.8
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 4.4e-34 147.9 105 70.5
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 4.4e-34 147.9 106 71.7
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.5e-34 147.1 102 72.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 9.8e-34 146.7 106 70.8
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.3e-33 146.4 103 73.8
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.7e-33 146.0 103 71.8
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 2.2e-33 145.6 106 69.8
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 2.2e-33 145.6 102 72.5
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 2.2e-33 145.6 103 69.9
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.9e-33 145.2 99 72.7
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 4.9e-33 144.4 102 70.6
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 6.4e-33 144.1 105 71.4
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.4e-32 142.9 101 71.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.8e-32 142.5 102 68.6
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.8e-32 142.5 103 69.9
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.8e-32 142.5 97 74.2
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.4e-32 142.1 103 68.9
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 68.6
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.2e-32 141.7 100 70.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 68.6
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 5.4e-32 141.0 106 68.9
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 5.4e-32 141.0 104 69.2
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 5.4e-32 141.0 103 69.9
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 7.0e-32 140.6 102 70.6
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 9.2e-32 140.2 106 67.9
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 70.6
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.6e-31 139.4 104 69.2
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 1.6e-31 139.4 102 68.6
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 2.0e-31 139.0 102 69.6
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 2.0e-31 139.0 102 69.6
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 3.5e-31 138.3 104 70.2
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 3.5e-31 138.3 104 69.2
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 3.5e-31 138.3 102 66.7
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 3.5e-31 138.3 101 71.3
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 3.5e-31 138.3 98 74.5
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 3.5e-31 138.3 102 69.6
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 4.6e-31 137.9 102 69.6
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 4.6e-31 137.9 104 68.3
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 5.9e-31 137.5 99 69.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 5.9e-31 137.5 104 68.3
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 7.8e-31 137.1 104 68.3
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 7.8e-31 137.1 104 68.3
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 7.8e-31 137.1 104 68.3
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 7.8e-31 137.1 104 68.3
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 66.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 2.3e-30 135.6 104 67.3
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 3.0e-30 135.2 99 69.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.0e-30 135.2 99 69.7
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 3.0e-30 135.2 103 68.0
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 3.9e-30 134.8 104 67.3
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 3.9e-30 134.8 98 69.4
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 3.9e-30 134.8 103 66.0
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 5.0e-30 134.4 104 65.4
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 5.0e-30 134.4 102 70.6
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 8.6e-30 133.7 99 68.7
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 8.6e-30 133.7 99 68.7
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.1e-29 133.3 104 67.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.1e-29 133.3 104 65.4
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.1e-29 133.3 101 67.3
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.5e-29 132.9 104 65.4
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.9e-29 132.5 104 66.3
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.5e-29 132.1 96 69.8
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 3.3e-29 131.7 106 62.3
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 4.3e-29 131.3 104 66.3
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 4.3e-29 131.3 104 63.5
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 4.3e-29 131.3 96 68.8
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 4.3e-29 131.3 102 63.7
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 5.6e-29 131.0 102 64.7
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 5.6e-29 131.0 102 64.7
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 5.6e-29 131.0 104 68.3
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 5.6e-29 131.0 103 61.2
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 7.3e-29 130.6 97 66.0
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 9.5e-29 130.2 99 66.7
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 1.2e-28 129.8 107 61.7
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.2e-28 129.8 99 67.7
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.1e-28 129.0 106 59.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 3.6e-28 128.3 100 64.0
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.6e-28 128.3 104 67.3
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.6e-28 128.3 106 59.4
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 4.7e-28 127.9 102 64.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 4.7e-28 127.9 116 62.1
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 6.2e-28 127.5 104 64.4
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 6.2e-28 127.5 103 62.1
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 6.8e-27 124.0 104 60.6
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 2.9e-25 118.6 97 58.8
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 3.7e-25 118.2 97 59.8
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 3.7e-25 118.2 104 57.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 2.4e-24 115.5 98 61.2
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 3.2e-24 115.2 156 48.1
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 9.2e-24 113.6 98 61.2
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.2e-23 113.2 80 71.2
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 6.0e-23 110.9 80 70.0
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.0e-22 108.6 81 67.9
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.0e-22 107.8 79 68.4
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.5e-21 106.3 80 70.0
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.5e-21 106.3 80 68.8
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.9e-21 105.9 77 70.1
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.9e-21 105.9 98 59.2
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 3.3e-21 105.1 105 55.2
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 4.3e-21 104.8 100 52.0
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 2.1e-20 102.4 80 65.0
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.8e-20 102.1 82 59.8
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.4e-19 99.8 75 66.7
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.5e-18 96.3 176 36.9
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 5.8e-18 94.4 81 59.3
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 7.5e-18 94.0 86 57.0
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 2.9e-17 92.0 74 64.9
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.1e-16 90.1 78 61.5
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.9e-16 89.4 91 52.7
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 5.1e-14 81.3 92 45.7
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 1.1e-13 80.1 94 46.8
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 4.0e-11 71.6 60 58.3
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 4.0e-11 71.6 60 58.3
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.3e-09 66.6 55 61.8
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 3.2e-08 62.0 51 54.9
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 2.3e-06 55.8 89 37.1
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 3.9e-06 55.1 73 41.1


User provided reference genes

Program Settings