Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 1.5e-68 262.7 131 100.0
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.2e-54 216.5 131 80.2
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 1.1e-53 213.4 130 79.2
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 5.2e-53 211.1 129 79.1
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 2.0e-52 209.1 131 76.3
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 7.6e-52 207.2 129 77.5
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 1.7e-51 206.1 129 76.0
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 5.4e-50 201.1 129 75.2
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 7.1e-50 200.7 129 72.1
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 4.6e-49 198.0 133 71.4
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 7.8e-49 197.2 129 69.8
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 1.0e-48 196.8 131 71.0
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.7e-48 196.1 131 73.3
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 6.6e-48 194.1 129 72.1
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 1.1e-47 193.4 126 73.8
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 1.9e-47 192.6 131 67.2
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 7.3e-47 190.7 131 66.4
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 9.6e-47 190.3 131 67.2
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 3.6e-46 188.3 131 65.6
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 4.7e-46 188.0 129 68.2
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 4.0e-45 184.9 116 75.9
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 6.8e-45 184.1 129 69.8
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 8.9e-45 183.7 129 68.2
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.5e-44 183.0 136 66.9
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.0e-44 182.6 130 65.4
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 3.4e-44 181.8 129 66.7
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 9.9e-44 180.3 130 63.8
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 2.9e-43 178.7 131 65.6
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 2.9e-43 178.7 130 63.1
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 2.9e-43 178.7 129 69.0
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 1.9e-42 176.0 128 63.3
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 2.4e-42 175.6 108 74.1
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 3.2e-42 175.3 129 64.3
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 1.6e-41 172.9 133 62.4
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 2.1e-41 172.6 130 61.5
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 2.1e-41 172.6 132 65.9
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 2.7e-41 172.2 131 63.4
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 4.6e-41 171.4 132 65.2
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 4.6e-41 171.4 128 65.6
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 7.8e-41 170.6 131 63.4
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 1.0e-40 170.2 129 65.9
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 1.7e-40 169.5 130 60.0
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 1.5e-39 166.4 130 60.8
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 1.5e-39 166.4 130 60.8
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 1.5e-39 166.4 128 61.7
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 1.9e-39 166.0 128 61.7
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 2.5e-39 165.6 128 62.5
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 5.6e-39 164.5 127 61.4
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 7.3e-39 164.1 125 62.4
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 7.3e-39 164.1 131 58.8
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 9.6e-39 163.7 116 64.7
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.6e-38 162.9 127 61.4
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 3.6e-38 161.8 128 61.7
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 1.1e-37 160.2 128 60.2
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 2.4e-37 159.1 126 59.5
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 3.1e-37 158.7 121 62.8
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 4.0e-37 158.3 128 58.6
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 3.4e-36 155.2 131 54.2
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 8.4e-35 150.6 119 61.3
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 8.4e-35 150.6 128 56.2
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 1.1e-34 150.2 125 56.8
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.9e-34 149.4 114 58.8
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 7.1e-34 147.5 132 56.1
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 7.1e-34 147.5 129 54.3
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 2.7e-33 145.6 97 67.0
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 6.0e-33 144.4 106 62.3
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 3.0e-32 142.1 137 55.5
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 5.1e-32 141.4 125 55.2
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 1.1e-31 140.2 78 78.2
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 1.1e-31 140.2 103 67.0
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 2.5e-31 139.0 86 70.9
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 6.2e-30 134.4 90 65.6
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 5.3e-29 131.3 122 52.5
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 6.9e-29 131.0 129 58.1
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 3.8e-27 125.2 142 47.9
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 4.2e-26 121.7 95 56.8
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 4.6e-25 118.2 126 45.2
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 4.6e-25 118.2 97 57.7
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 5.6e-23 111.3 151 42.4
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.3e-22 110.2 82 62.2
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 2.8e-22 109.0 74 66.2
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 4.8e-22 108.2 121 43.0
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 1.2e-20 103.6 78 61.5
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 1.0e-19 100.5 96 49.0
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 4.9e-19 98.2 57 80.7
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 6.5e-19 97.8 77 61.0
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 2.5e-18 95.9 119 41.2
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 7.9e-17 90.9 140 48.6
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 7.9e-17 90.9 69 60.9
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 6.7e-16 87.8 65 63.1
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.9e-15 86.3 142 42.3
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 2.5e-15 85.9 63 58.7
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 2.5e-15 85.9 66 62.1
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 5.3e-13 78.2 96 41.7
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 1.5e-12 76.6 68 54.4
FAN15G1907 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.3e-11 73.6 96 41.7
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 3.8e-11 72.0 47 68.1
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.9e-10 69.7 129 34.9
FAN24G3183 Fragaria x ananassa HOM05D007613 ORTHO05D009344 3.5e-09 65.5 64 46.9
FAN16G0236 Fragaria x ananassa HOM05D002174 ORTHO05D005941 1.5e-07 60.1 97 35.1
SEGI_00670 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 5.7e-07 58.2 98 38.8
unitig_0.g668 Utricularia gibba HOM05D007613 ORTHO05D009344 7.4e-07 57.8 35 71.4
CDE01G0513 Ceratophyllum demersum HOM05D002174 ORTHO05D005447 1.6e-06 56.6 100 31.0
Glyma.02G017851 Glycine max HOM05D007613 ORTHO05D009344 2.8e-06 55.8 51 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3892 Anthoceros agrestis HOM05D002174 ORTHO05D005941 4.8e-06 55.1 94 30.9
THA.LOC104800661 Tarenaya hassleriana HOM05D002174 ORTHO05D005941 4.8e-06 55.1 95 32.6
AagrBONN_evm.TU.Sc2ySwM_362.1645 Anthoceros agrestis HOM05D002174 ORTHO05D005941 8.2e-06 54.3 74 36.5
CSS0007494 Camellia sinensis var. sinensis HOM05D002174 ORTHO05D005941 8.2e-06 54.3 97 32.0


User provided reference genes

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