Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 5.7e-98 360.9 182 100.0
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.3e-20 104.0 175 37.7
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 2.1e-20 103.2 182 39.0
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 1.3e-17 94.0 191 39.8
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 1.7e-17 93.6 166 43.4
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.7e-17 93.6 166 43.4
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 4.9e-17 92.0 183 40.4
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 4.9e-17 92.0 168 42.9
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.6e-15 87.0 179 35.8
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 6.0e-15 85.1 171 38.0
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.0e-14 84.3 161 36.6
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 1.3e-14 84.0 142 42.3
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 5.1e-14 82.0 172 39.0
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 4.3e-13 79.0 174 37.9
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 8.1e-12 74.7 155 39.4
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 1.1e-11 74.3 154 36.4
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 3.1e-11 72.8 156 36.5
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 4.0e-11 72.4 177 32.8
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 4.0e-11 72.4 188 33.0
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 4.0e-11 72.4 165 35.8
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 4.0e-11 72.4 163 36.8
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 4.0e-11 72.4 188 34.6
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 6.9e-11 71.6 175 34.3
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 1.2e-10 70.9 172 35.5
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 1.5e-10 70.5 122 45.9
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 2.6e-10 69.7 174 36.8
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 2.6e-10 69.7 181 34.3
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 2.6e-10 69.7 168 33.9
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 3.4e-10 69.3 161 32.9
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 3.4e-10 69.3 179 35.8
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 4.5e-10 68.9 128 39.8
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 4.5e-10 68.9 122 45.1
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 4.5e-10 68.9 163 39.3
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 4.5e-10 68.9 161 39.1
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.8e-10 68.6 163 40.5
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 9.9e-10 67.8 163 39.3
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 1.3e-09 67.4 170 32.4
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 1.3e-09 67.4 164 33.5
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 2.2e-09 66.6 193 34.7
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 2.2e-09 66.6 182 34.1
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 2.2e-09 66.6 164 35.4
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 2.2e-09 66.6 186 29.0
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 2.2e-09 66.6 163 38.7
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 2.9e-09 66.2 170 32.9
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 3.8e-09 65.9 158 39.9
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 8.4e-09 64.7 152 33.6
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 8.4e-09 64.7 155 32.9
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 1.1e-08 64.3 160 35.6
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 1.1e-08 64.3 141 39.0
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 1.4e-08 63.9 196 30.1
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 1.9e-08 63.5 169 34.9
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 2.4e-08 63.2 174 32.2
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 3.2e-08 62.8 164 37.8
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 3.2e-08 62.8 171 32.2
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 5.5e-08 62.0 164 33.5
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 5.5e-08 62.0 140 35.7
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 5.5e-08 62.0 165 33.9
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 7.1e-08 61.6 156 35.9
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 9.3e-08 61.2 213 30.0
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 9.3e-08 61.2 157 34.4
DCAR_005774 Daucus carota HOM05D007468 ORTHO05D009051 1.2e-07 60.8 155 36.8
Thhalv10009861m.g Eutrema salsugineum HOM05D010095 ORTHO05D012148 1.2e-07 60.8 169 29.6
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 2.1e-07 60.1 163 33.7
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 2.1e-07 60.1 222 29.3
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 4.6e-07 58.9 154 35.1
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 6.0e-07 58.5 170 31.8
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 6.0e-07 58.5 184 29.9
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 6.0e-07 58.5 183 30.1
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 7.9e-07 58.2 174 29.3
Gorai.008G141500 Gossypium raimondii HOM05D041120 ORTHO05D009051 7.9e-07 58.2 182 33.5
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 7.9e-07 58.2 203 30.0
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 7.9e-07 58.2 179 32.4
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.3e-06 57.4 151 31.1
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 1.8e-06 57.0 158 32.9
Gohir.D12G130200 Gossypium hirsutum HOM05D041120 ORTHO05D009051 1.8e-06 57.0 182 33.0
Gohir.A12G126800 Gossypium hirsutum HOM05D041120 ORTHO05D009051 2.3e-06 56.6 181 32.0
C09p01700 Brassica napus HOM05D010095 ORTHO05D012148 3.9e-06 55.8 183 28.4
BolC9t53104H Brassica oleracea HOM05D010095 ORTHO05D012148 3.9e-06 55.8 183 28.4
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 5.1e-06 55.5 183 31.1
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 6.7e-06 55.1 157 35.7
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 6.7e-06 55.1 187 28.3


User provided reference genes

Program Settings