Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-101 372.9 181 100.0
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.4e-88 328.9 178 91.0
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-76 289.3 181 80.1
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.7e-76 288.1 181 78.5
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-72 276.2 178 78.7
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-65 253.4 181 75.1
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.2e-61 238.8 154 79.2
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-59 232.3 149 77.9
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-49 200.3 182 64.8
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.1e-48 195.3 182 63.2
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 1.1e-40 170.6 187 50.3
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.5e-37 160.2 188 47.3
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.9e-37 159.8 187 50.8
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 7.3e-37 157.9 166 53.6
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.6e-36 155.6 189 50.3
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 4.7e-36 155.2 187 48.7
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 6.1e-36 154.8 180 50.0
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 8.9e-35 151.0 183 45.9
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 1.2e-34 150.6 192 47.9
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.5e-34 150.2 185 48.6
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 2.0e-34 149.8 178 48.3
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 2.0e-34 149.8 184 48.4
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.6e-34 149.4 183 50.3
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 3.4e-34 149.1 187 46.5
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 3.4e-34 149.1 183 49.2
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 5.8e-34 148.3 178 45.5
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.3e-33 147.1 187 46.0
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 2.2e-33 146.4 191 48.2
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 2.2e-33 146.4 182 47.3
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.2e-33 146.4 197 44.2
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 2.2e-33 146.4 198 41.9
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 3.7e-33 145.6 178 48.3
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 3.7e-33 145.6 180 47.8
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.9e-33 145.2 180 47.8
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 4.9e-33 145.2 192 46.9
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 6.4e-33 144.8 186 48.4
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.4e-33 144.8 187 45.5
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.1e-32 144.1 182 44.5
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.4e-32 143.7 186 44.1
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 1.4e-32 143.7 177 45.8
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.9e-32 143.3 178 46.1
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.9e-32 143.3 192 46.4
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 2.4e-32 142.9 183 47.5
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.4e-32 142.9 177 44.6
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 3.2e-32 142.5 184 47.3
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 3.2e-32 142.5 182 46.2
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 4.1e-32 142.1 167 49.1
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 9.2e-32 141.0 169 55.6
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-31 140.6 191 47.6
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.2e-31 140.6 189 46.6
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 2.0e-31 139.8 186 47.3
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.0e-31 139.8 189 41.8
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 2.7e-31 139.4 203 41.4
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 2.7e-31 139.4 193 46.1
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 4.6e-31 138.7 167 47.9
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 7.8e-31 137.9 166 47.6
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 1.0e-30 137.5 167 47.9
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 1.0e-30 137.5 167 47.9
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.0e-30 137.5 167 46.7
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.3e-30 137.1 176 48.9
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 2.3e-30 136.3 171 46.2
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 2.3e-30 136.3 173 46.8
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 3.0e-30 136.0 171 47.4
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 3.0e-30 136.0 176 46.6
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 3.0e-30 136.0 174 46.6
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 3.0e-30 136.0 167 43.7
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.0e-30 136.0 176 47.2
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 3.9e-30 135.6 165 46.1
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 5.0e-30 135.2 173 44.5
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 5.0e-30 135.2 190 47.4
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.5e-29 133.7 192 44.8
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.9e-29 133.3 174 45.4
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 1.9e-29 133.3 173 45.7
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.9e-29 133.3 193 44.6
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 2.5e-29 132.9 191 44.0
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 3.3e-29 132.5 165 46.7
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 3.3e-29 132.5 182 43.4
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 5.6e-29 131.7 192 43.8
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 5.6e-29 131.7 178 47.2
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 5.6e-29 131.7 181 43.6
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 7.3e-29 131.3 194 45.4
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 9.5e-29 131.0 165 46.1
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 9.5e-29 131.0 183 46.4
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 1.2e-28 130.6 191 40.8
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 1.2e-28 130.6 183 43.2
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 1.6e-28 130.2 184 41.3
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.6e-28 130.2 183 42.6
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 2.1e-28 129.8 170 46.5
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.1e-28 129.8 191 45.5
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 2.1e-28 129.8 189 41.3
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 2.1e-28 129.8 171 43.9
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.8e-28 129.4 186 43.5
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 3.6e-28 129.0 178 43.3
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 4.7e-28 128.6 168 44.0
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 4.7e-28 128.6 168 47.6
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 4.7e-28 128.6 168 47.6
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.7e-28 128.6 195 44.1
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.7e-28 128.6 195 44.1
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.7e-28 128.6 195 44.1
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 6.2e-28 128.3 181 42.5
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 8.0e-28 127.9 194 42.8
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.1e-27 127.5 221 40.3
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.1e-27 127.5 202 44.6
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 1.8e-27 126.7 162 44.4
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 1.8e-27 126.7 170 47.1
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 1.8e-27 126.7 170 47.1
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.3e-27 126.3 190 43.7
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.1e-27 125.9 189 41.8
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 4.0e-27 125.6 192 42.2
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 5.2e-27 125.2 174 44.8
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 8.9e-27 124.4 163 47.2
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 1.2e-26 124.0 182 47.3
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 2.0e-26 123.2 166 44.0
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 2.0e-26 123.2 186 42.5
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 2.0e-26 123.2 182 42.9
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 2.6e-26 122.9 172 45.9
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 5.8e-26 121.7 168 42.9
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 7.5e-26 121.3 170 43.5
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 7.5e-26 121.3 186 43.0
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 2.9e-25 119.4 168 44.0
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 8.3e-25 117.9 177 41.2
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.4e-24 117.1 175 41.7
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.4e-24 117.1 175 43.4
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 1.9e-24 116.7 184 41.8
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 4.1e-24 115.5 175 41.7
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.1e-24 115.5 170 46.5
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 4.1e-24 115.5 172 43.0
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 5.4e-24 115.2 174 43.7
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.2e-23 114.0 175 43.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.2e-23 114.0 178 41.6
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 2.1e-23 113.2 175 40.6
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.5e-23 112.5 161 40.4
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 7.8e-23 111.3 173 42.8
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 7.8e-23 111.3 168 44.6
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-22 110.2 175 40.0
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-22 110.2 175 40.0
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.7e-22 110.2 175 40.0
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.7e-22 110.2 189 40.7
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 3.0e-22 109.4 178 41.0
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.1e-21 107.5 180 40.6
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 4.7e-20 102.1 171 40.4
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 4.7e-20 102.1 177 39.0
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.4e-19 100.5 151 43.7
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-19 99.8 100 57.0
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 2.3e-19 99.8 169 38.5
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 3.1e-19 99.4 182 39.6
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.0e-18 96.7 176 39.8
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 2.6e-18 96.3 170 41.2
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.7e-17 93.6 141 41.8
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 2.9e-17 92.8 153 39.9
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 8.3e-17 91.3 204 34.3
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 7.1e-16 88.2 169 39.6
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 7.8e-15 84.7 171 36.3
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 1.3e-14 84.0 199 33.2
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 2.3e-14 83.2 153 39.2
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 5.1e-14 82.0 171 36.8
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.6e-14 81.3 109 46.8
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.1e-13 80.9 178 33.7
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.6e-12 77.0 157 35.7
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-12 77.0 128 43.8
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-12 76.6 106 50.0
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 3.6e-12 75.9 144 38.9
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 2.4e-11 73.2 217 31.8
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 3.1e-11 72.8 95 46.3
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 4.0e-11 72.4 167 35.3
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-10 70.1 158 38.6
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 3.8e-09 65.9 212 29.2
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.1e-08 64.3 170 32.9
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 1.4e-08 63.9 212 30.7
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.9e-08 63.5 158 29.7
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 3.2e-08 62.8 173 31.2
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 1.6e-07 60.5 110 37.3
Nn2g14986 Nelumbo nucifera HOM05D003790 ORTHO05D004481 3.5e-07 59.3 51 51.0
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-06 57.4 87 47.1
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 5.1e-06 55.5 171 32.2
Nn2g11432 Nelumbo nucifera HOM05D003790 ORTHO05D004481 6.6e-06 55.1 44 59.1


User provided reference genes

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