Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 2.5e-75 285.4 149 100.0
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 9.3e-22 107.5 86 70.9
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 1.2e-21 107.1 85 70.6
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 4.6e-21 105.1 86 68.6
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 4.6e-21 105.1 83 69.9
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 1.7e-20 103.2 86 68.6
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 2.3e-20 102.8 93 61.3
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 3.0e-20 102.4 85 67.1
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 5.1e-20 101.7 84 66.7
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.1e-19 100.5 96 58.3
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 1.1e-19 100.5 99 59.6
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 1.1e-19 100.5 94 63.8
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 2.5e-19 99.4 86 64.0
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 3.3e-19 99.0 84 65.5
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 5.6e-19 98.2 96 60.4
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 9.6e-19 97.4 96 60.4
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 9.6e-19 97.4 86 61.6
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 9.6e-19 97.4 96 60.4
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.3e-18 97.1 135 48.9
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.6e-18 96.7 92 57.6
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 1.6e-18 96.7 84 64.3
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 2.8e-18 95.9 85 63.5
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 6.2e-18 94.7 94 61.7
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 1.1e-17 94.0 84 59.5
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 1.1e-17 94.0 93 60.2
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 2.4e-17 92.8 86 60.5
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 2.4e-17 92.8 93 59.1
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 3.1e-17 92.4 85 56.5
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 3.1e-17 92.4 81 65.4
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 5.3e-17 91.7 85 62.4
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 1.5e-16 90.1 115 52.2
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.6e-16 89.4 105 53.3
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 4.5e-16 88.6 105 52.4
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.8e-16 88.2 97 57.7
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 9.9e-16 87.4 92 57.6
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 1.3e-15 87.0 87 58.6
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.3e-15 87.0 80 63.8
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 1.3e-15 87.0 84 58.3
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 2.2e-15 86.3 89 53.9
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 2.2e-15 86.3 97 56.7
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.2e-15 86.3 97 56.7
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.2e-15 86.3 85 61.2
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 2.2e-15 86.3 85 61.2
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 2.2e-15 86.3 97 55.7
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 2.9e-15 85.9 87 59.8
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 2.9e-15 85.9 78 62.8
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 3.8e-15 85.5 78 62.8
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 4.9e-15 85.1 72 66.7
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 6.4e-15 84.7 79 60.8
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 8.4e-15 84.3 92 54.3
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 8.4e-15 84.3 85 60.0
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 8.4e-15 84.3 85 56.5
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 8.4e-15 84.3 78 57.7
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 8.4e-15 84.3 80 61.2
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.4e-14 83.6 92 54.3
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 1.9e-14 83.2 80 58.8
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 1.9e-14 83.2 85 54.1
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 3.2e-14 82.4 93 54.8
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 4.2e-14 82.0 96 52.1
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 4.2e-14 82.0 86 52.3
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 5.4e-14 81.6 96 52.1
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 7.1e-14 81.3 81 60.5
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 1.2e-13 80.5 93 53.8
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 1.6e-13 80.1 78 56.4
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 4.6e-13 78.6 102 45.1
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 6.0e-13 78.2 76 56.6
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 7.9e-13 77.8 76 57.9
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 7.9e-13 77.8 78 61.5
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 1.0e-12 77.4 81 55.6
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 6.7e-12 74.7 77 55.8
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 8.7e-12 74.3 91 50.5
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 3.3e-11 72.4 106 47.2
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 3.3e-11 72.4 79 54.4
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 4.3e-11 72.0 83 53.0
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 5.6e-11 71.6 94 46.8
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 7.4e-11 71.2 87 48.3
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 9.6e-11 70.9 81 48.1
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 1.3e-10 70.5 94 47.9
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.3e-10 70.5 80 56.2
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 2.8e-10 69.3 94 46.8
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 4.8e-10 68.6 82 50.0
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 4.8e-10 68.6 86 50.0
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 8.1e-10 67.8 60 56.7
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 1.1e-09 67.4 86 46.5
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 1.4e-09 67.0 76 51.3
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 1.8e-09 66.6 93 45.2
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 2.4e-09 66.2 85 47.1
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 2.4e-09 66.2 84 46.4
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 1.5e-08 63.5 81 53.1
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 2.6e-08 62.8 60 60.0
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 4.5e-08 62.0 109 45.9
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 4.5e-08 62.0 93 45.2
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 60.1 63 50.8
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 2.9e-07 59.3 86 44.2
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 6.4e-07 58.2 86 44.2
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 8.4e-07 57.8 86 45.3


User provided reference genes

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