Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.6e-56 222.6 117 100.0
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.0e-56 222.2 117 99.1
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.6e-45 186.0 117 81.2
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 1.2e-43 179.9 117 80.3
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 2.6e-43 178.7 117 78.6
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 3.7e-42 174.9 114 78.1
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 3.7e-42 174.9 117 76.1
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 3.7e-42 174.9 111 81.1
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 8.3e-42 173.7 117 77.8
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.1e-41 173.3 111 78.4
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 1.1e-41 173.3 110 80.0
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 1.1e-41 173.3 117 77.8
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.8e-41 172.6 111 80.2
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 3.1e-41 171.8 110 79.1
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 4.1e-41 171.4 107 79.4
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 5.4e-41 171.0 117 75.2
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 7.0e-41 170.6 109 79.8
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 9.1e-41 170.2 110 80.9
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 9.1e-41 170.2 110 80.9
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.2e-40 169.9 110 77.3
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 2.0e-40 169.1 116 73.3
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.7e-40 168.7 110 77.3
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 3.5e-40 168.3 110 75.5
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 4.5e-40 167.9 110 80.0
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 5.9e-40 167.5 111 73.0
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.0e-39 166.8 114 73.7
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.7e-39 166.0 110 78.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.3e-39 165.6 111 72.1
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 2.9e-39 165.2 110 80.0
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 2.9e-39 165.2 111 76.6
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 3.8e-39 164.9 111 72.1
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.8e-39 164.9 111 77.5
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 6.6e-39 164.1 112 75.9
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 8.6e-39 163.7 111 76.6
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 8.6e-39 163.7 111 77.5
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 8.6e-39 163.7 112 75.9
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 75.7
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 75.7
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 75.7
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 75.7
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 75.7
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.9e-38 162.5 113 74.3
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.9e-38 162.5 112 75.0
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.5e-38 162.2 111 76.6
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 2.5e-38 162.2 111 76.6
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 2.5e-38 162.2 117 70.1
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.5e-38 162.2 117 73.5
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 2.5e-38 162.2 117 73.5
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 3.3e-38 161.8 108 75.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 3.3e-38 161.8 111 73.9
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 4.2e-38 161.4 110 77.3
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 4.2e-38 161.4 110 75.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 4.2e-38 161.4 112 74.1
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 9.5e-38 160.2 111 73.0
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 9.5e-38 160.2 111 73.0
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.2e-37 159.8 112 72.3
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 1.6e-37 159.5 113 74.3
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.6e-37 159.5 106 77.4
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.8e-37 158.7 106 77.4
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.6e-37 158.3 111 73.0
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 4.7e-37 157.9 103 78.6
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 4.7e-37 157.9 112 70.5
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 4.7e-37 157.9 111 70.3
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 4.7e-37 157.9 111 73.0
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 6.1e-37 157.5 111 70.3
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 8.0e-37 157.1 111 71.2
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 8.0e-37 157.1 113 74.3
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 1.0e-36 156.8 117 68.4
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.0e-36 156.8 110 72.7
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 72.1
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.8e-36 156.0 112 71.4
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 3.0e-36 155.2 117 67.5
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.0e-36 155.2 114 71.9
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 4.0e-36 154.8 117 67.5
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 5.2e-36 154.5 112 70.5
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 8.9e-36 153.7 136 64.0
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.2e-35 153.3 110 72.7
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.5e-35 152.9 111 73.0
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.5e-35 152.9 106 72.6
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.5e-35 152.9 107 73.8
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 5.7e-35 151.0 111 70.3
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 9.8e-35 150.2 106 70.8
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.7e-34 149.4 97 79.4
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.2e-34 149.1 113 69.9
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 1.2e-32 143.3 95 76.8
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.9e-32 141.0 88 84.1
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.1e-30 136.7 83 83.1
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.9e-30 136.0 82 84.1
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 5.6e-30 134.4 106 64.2
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 9.5e-30 133.7 105 68.6
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.2e-29 133.3 170 48.8
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.2e-29 133.3 82 81.7
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 2.1e-29 132.5 89 75.3
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 3.6e-29 131.7 83 77.1
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.8e-28 129.4 89 73.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.0e-28 128.3 89 73.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 6.8e-28 127.5 112 58.9
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 5.8e-27 124.4 80 80.0
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 5.8e-27 124.4 87 69.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 5.8e-27 124.4 83 74.7
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 9.8e-27 123.6 84 73.8
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 9.8e-27 123.6 81 76.5
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.7e-26 122.9 83 69.9
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.9e-26 121.3 91 71.4
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 6.4e-26 120.9 125 59.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 3.5e-24 115.2 84 67.9
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.1e-21 105.9 79 69.6
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.4e-20 103.2 84 64.3
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 5.2e-20 101.3 116 48.3
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 6.8e-20 100.9 64 79.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.7e-18 96.3 52 92.3
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.6e-16 89.7 61 75.4
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 2.7e-16 89.0 112 50.0
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 4.6e-16 88.2 67 67.2
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 5.1e-15 84.7 121 42.1
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 5.1e-15 84.7 51 78.4
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.3e-12 75.9 60 66.7
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.4e-11 71.6 107 44.9


User provided reference genes

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