Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 6.3e-58 227.3 117 100.0
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 4.7e-37 157.9 108 75.9
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 8.0e-37 157.1 108 75.9
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.0e-36 156.8 108 75.0
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.4e-35 151.8 108 73.1
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.4e-35 151.4 103 75.7
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 5.7e-35 151.0 105 71.4
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 5.7e-35 151.0 101 76.2
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.7e-34 149.4 101 75.2
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 2.2e-34 149.1 108 74.1
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 4.9e-34 147.9 109 72.5
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 8.3e-34 147.1 107 70.1
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.1e-33 146.7 107 71.0
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.1e-33 146.7 107 71.0
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.1e-33 146.7 107 74.8
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.8e-33 146.0 102 74.5
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 2.4e-33 145.6 105 73.3
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 2.4e-33 145.6 105 73.3
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 3.1e-33 145.2 104 76.9
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.1e-33 145.2 107 70.1
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 4.1e-33 144.8 105 71.4
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 5.4e-33 144.4 108 72.2
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 7.0e-33 144.1 105 73.3
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 7.0e-33 144.1 105 73.3
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 9.2e-33 143.7 107 70.1
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.2e-32 143.3 107 69.2
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 1.6e-32 142.9 101 73.3
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 2.0e-32 142.5 101 72.3
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.0e-32 142.5 107 71.0
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.7e-32 142.1 104 75.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.7e-32 142.1 103 71.8
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 4.5e-32 141.4 104 75.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 4.5e-32 141.4 114 67.5
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 4.5e-32 141.4 101 70.3
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.0e-31 140.2 112 69.6
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.9e-31 138.7 103 68.0
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.8e-31 138.3 109 69.7
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 5.0e-31 137.9 102 70.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 8.6e-31 137.1 103 68.9
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.1e-30 136.7 112 67.9
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.5e-30 136.3 105 69.5
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.5e-30 136.3 106 70.8
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.9e-30 136.0 109 67.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 1.9e-30 136.0 104 64.4
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.9e-30 136.0 110 68.2
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.3e-30 135.2 110 68.2
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.3e-30 135.2 110 68.2
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 3.3e-30 135.2 104 68.3
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 5.6e-30 134.4 106 66.0
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 5.6e-30 134.4 95 72.6
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.6e-30 134.4 122 58.2
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 7.3e-30 134.0 107 68.2
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 9.5e-30 133.7 107 69.2
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.2e-29 133.3 105 61.0
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 1.2e-29 133.3 115 62.6
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.2e-29 133.3 103 68.9
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.6e-29 132.9 102 71.6
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 2.8e-29 132.1 105 65.7
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.8e-29 132.1 103 68.0
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 3.6e-29 131.7 119 58.8
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.0e-28 130.2 112 61.6
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.4e-28 129.8 101 65.3
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.8e-28 129.4 116 61.2
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 2.3e-28 129.0 118 58.5
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 2.3e-28 129.0 98 69.4
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 2.3e-28 129.0 112 62.5
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 3.0e-28 128.6 118 58.5
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 4.0e-28 128.3 107 65.4
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 5.2e-28 127.9 111 64.0
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.2e-28 127.9 106 61.3
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.2e-28 127.9 101 65.3
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 6.8e-28 127.5 118 58.5
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 8.9e-28 127.1 112 64.3
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 8.9e-28 127.1 108 64.8
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 1.2e-27 126.7 117 55.6
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.2e-27 126.7 95 68.4
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.5e-27 126.3 105 68.6
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.5e-27 126.3 115 57.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 2.0e-27 125.9 118 58.5
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.0e-27 125.9 116 59.5
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 2.0e-27 125.9 115 57.4
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 2.6e-27 125.6 118 57.6
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 2.6e-27 125.6 118 57.6
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 2.6e-27 125.6 118 57.6
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.4e-27 125.2 115 59.1
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 4.4e-27 124.8 121 57.0
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 4.4e-27 124.8 104 62.5
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 5.8e-27 124.4 109 62.4
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 7.5e-27 124.0 106 60.4
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 7.5e-27 124.0 106 61.3
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 7.5e-27 124.0 105 64.8
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 9.8e-27 123.6 108 60.2
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.7e-26 122.9 108 61.1
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.7e-26 122.9 105 59.0
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 4.9e-26 121.3 107 61.7
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 8.3e-26 120.6 116 56.0
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 8.3e-26 120.6 102 59.8
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 8.3e-26 120.6 108 59.3
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 8.3e-26 120.6 111 59.5
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.4e-25 119.8 114 53.5
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 1.4e-25 119.8 108 60.2
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 2.4e-25 119.0 111 60.4
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 2.4e-25 119.0 105 64.8
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.5e-24 115.2 117 53.8
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.0e-23 113.6 112 55.4
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 1.3e-23 113.2 112 52.7
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 2.3e-23 112.5 93 60.2
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.3e-23 112.5 115 53.9
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.0e-23 112.1 95 62.1
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.5e-22 109.8 112 55.4
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.3e-22 108.6 105 53.3
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 4.3e-22 108.2 118 53.4
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 4.3e-22 108.2 118 53.4
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 7.3e-22 107.5 105 53.3
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-21 105.9 113 54.0
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 8.0e-21 104.0 112 51.8
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 8.0e-21 104.0 92 56.5
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 8.0e-21 104.0 105 52.4
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 3.4e-19 98.6 107 48.6
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 5.8e-19 97.8 110 50.9
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 9.8e-19 97.1 115 47.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.7e-18 96.3 113 49.6
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 4.9e-18 94.7 118 46.6
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 9.2e-17 90.5 108 48.1
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.6e-16 89.7 81 60.5
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 3.0e-15 85.5 67 70.1
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 2.6e-11 72.4 68 55.9
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.3e-10 70.1 56 67.9
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.2e-09 65.5 55 67.3


User provided reference genes

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